Cre07.g344050


Description : 29.2.2.3.4 protein.synthesis.ribosome biogenesis.Pre-rRNA processing and modifications.WD-repeat proteins Encodes a nucleolar localized WD-40 repeat protein that is preferentially expressed in dividing cells and is required for regulated division planes and embryo development. TORMOZEMBRYO DEFECTIVE (TOZ)


Gene families : OG_01_0004864 (Gene family) Phylogenetic Tree(s): OG0004864_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cre07.g344050
Cluster HCCA cluster: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AT5G16750 TOZ Transducin family protein / WD-40 repeat family protein 0.18 Gene family
Cpa|evm.model.tig00000704.61 No alias 29.2.2.3.4 protein.synthesis.ribosome... 0.05 Gene family
Cpa|evm.model.tig00000704.62 No alias 29.2.2.3.4 protein.synthesis.ribosome... 0.02 Gene family
GSVIVT01024351001 No alias 29.2.2.3.4 protein.synthesis.ribosome... 0.07 Gene family
LOC_Os04g50660 Os04g0592700 29.2.2.3.4 protein.synthesis.ribosome... 0.2 Gene family
MA_566936g0010 No alias 29.2.2.3.4 protein.synthesis.ribosome... 0.01 Gene family
Smo80645 PACid_15406827 29.2.2.3.4 protein.synthesis.ribosome... 0.06 Gene family
Solyc03g097160.3.1 Solyc03g097160.3 29.2.2.3.4 protein.synthesis.ribosome... 0.12 Gene family
Zm00001d002483 GRMZM2G014276 29.2.2.3.4 protein.synthesis.ribosome... 0.04 Gene family
Zm00001d026195 GRMZM2G128092 29.2.2.3.4 protein.synthesis.ribosome... 0.14 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013934 SSU_processome_Utp13 760 917
IPR001680 WD40_repeat 619 654
IPR001680 WD40_repeat 580 612
IPR001680 WD40_repeat 176 213
IPR001680 WD40_repeat 658 696
IPR001680 WD40_repeat 133 170
IPR001680 WD40_repeat 218 255
IPR001680 WD40_repeat 483 521
No external refs found!