Solyc01g067660.3.1


Description : beta amylase


Gene families : OG_01_0000278 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000278_tree ,
OG_02_0007349 (LandPlants) Phylogenetic Tree(s): OG_02_0007349_tree ,
OG_03_0003218 (SeedPlants) Phylogenetic Tree(s): OG_03_0003218_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g067660.3.1
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00150440 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.02 Archaeplastida
AMTR_s00050p00205080 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.02 Archaeplastida
AMTR_s00057p00154460 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.03 Archaeplastida
AMTR_s00098p00153370 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.02 Archaeplastida
AT4G15210 RAM1, BMY1,... beta-amylase 5 0.04 Archaeplastida
Gb_14166 No alias beta amylase 0.03 Archaeplastida
Gb_23608 No alias beta amylase 0.03 Archaeplastida
Gb_28692 No alias beta amylase 0.04 Archaeplastida
LOC_Os07g47120.1 No alias beta amylase 0.03 Archaeplastida
LOC_Os10g41550.1 No alias beta amylase 0.04 Archaeplastida
MA_7600339g0010 No alias Beta-amylase 1, chloroplastic OS=Arabidopsis thaliana... 0.03 Archaeplastida
Mp1g06930.1 No alias beta amylase 0.01 Archaeplastida
Pp3c6_10130V3.1 No alias beta-amylase 1 0.03 Archaeplastida
Smo232533 No alias Carbohydrate metabolism.starch... 0.02 Archaeplastida
Zm00001e035797_P003 No alias beta amylase 0.02 Archaeplastida
Zm00001e037830_P001 No alias beta amylase 0.02 Archaeplastida
AMTR_s00057p00154460 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.03 LandPlants
LOC_Os07g47120.1 No alias beta amylase 0.02 LandPlants
Zm00001e035797_P003 No alias beta amylase 0.02 LandPlants
AMTR_s00057p00154460 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.02 SeedPlants
Zm00001e035797_P003 No alias beta amylase 0.02 SeedPlants

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEA Interproscan
MF GO:0016161 beta-amylase activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001554 Glyco_hydro_14 92 493
No external refs found!