Solyc01g009390.4.1


Description : regulatory component DCP1 of mRNA decapping complex


Gene families : OG_01_0002193 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002193_tree ,
OG_02_0002839 (LandPlants) Phylogenetic Tree(s): OG_02_0002839_tree ,
OG_03_0003071 (SeedPlants) Phylogenetic Tree(s): OG_03_0003071_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g009390.4.1
Cluster HCCA: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00114p00117470 evm_27.TU.AmTr_v1... RNA processing.RNA decay.deadenylation-dependent... 0.02 Archaeplastida
GSVIVT01033895001 No alias RNA processing.RNA decay.deadenylation-dependent... 0.09 Archaeplastida
GSVIVT01036083001 No alias RNA processing.RNA decay.deadenylation-dependent... 0.06 Archaeplastida
LOC_Os07g14580.1 No alias regulatory component DCP1 of mRNA decapping complex 0.02 Archaeplastida
LOC_Os11g05650.1 No alias regulatory component DCP1 of mRNA decapping complex 0.07 Archaeplastida
MA_10436574g0010 No alias regulatory component DCP1 of mRNA decapping complex 0.03 Archaeplastida
Zm00001e024154_P001 No alias regulatory component DCP1 of mRNA decapping complex 0.07 Archaeplastida
AMTR_s00114p00117470 evm_27.TU.AmTr_v1... RNA processing.RNA decay.deadenylation-dependent... 0.02 LandPlants
GSVIVT01033895001 No alias RNA processing.RNA decay.deadenylation-dependent... 0.07 LandPlants
GSVIVT01036083001 No alias RNA processing.RNA decay.deadenylation-dependent... 0.05 LandPlants
LOC_Os07g14580.1 No alias regulatory component DCP1 of mRNA decapping complex 0.02 LandPlants
LOC_Os11g05650.1 No alias regulatory component DCP1 of mRNA decapping complex 0.04 LandPlants
Mp1g25660.1 No alias regulatory component DCP1 of mRNA decapping complex 0.01 LandPlants
Pp3c5_13560V3.1 No alias decapping 1 0.02 LandPlants
Zm00001e009128_P001 No alias regulatory component DCP1 of mRNA decapping complex 0.02 LandPlants
Zm00001e024154_P001 No alias regulatory component DCP1 of mRNA decapping complex 0.05 LandPlants
AMTR_s00114p00117470 evm_27.TU.AmTr_v1... RNA processing.RNA decay.deadenylation-dependent... 0.02 SeedPlants
GSVIVT01033895001 No alias RNA processing.RNA decay.deadenylation-dependent... 0.07 SeedPlants
GSVIVT01036083001 No alias RNA processing.RNA decay.deadenylation-dependent... 0.05 SeedPlants
LOC_Os07g14580.1 No alias regulatory component DCP1 of mRNA decapping complex 0.02 SeedPlants
LOC_Os11g05650.1 No alias regulatory component DCP1 of mRNA decapping complex 0.04 SeedPlants
Zm00001e009128_P001 No alias regulatory component DCP1 of mRNA decapping complex 0.02 SeedPlants
Zm00001e024154_P001 No alias regulatory component DCP1 of mRNA decapping complex 0.05 SeedPlants

Type GO Term Name Evidence Source
BP GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA IEA Interproscan
MF GO:0008047 enzyme activator activity IEA Interproscan
BP GO:0043085 positive regulation of catalytic activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010334 Dcp1 18 131
No external refs found!