Solyc01g005920.3.1


Description : amino acid transporter (LAT)


Gene families : OG_01_0000896 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000896_tree ,
OG_02_0000706 (LandPlants) Phylogenetic Tree(s): OG_02_0000706_tree ,
OG_03_0005574 (SeedPlants) Phylogenetic Tree(s): OG_03_0005574_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g005920.3.1
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01022800001 No alias Solute transport.carrier-mediated transport.APC... 0.03 Archaeplastida
LOC_Os03g25920.1 No alias amino acid transporter (LAT) 0.03 Archaeplastida
MA_1524444g0010 No alias amino acid transporter (LAT) 0.01 Archaeplastida
MA_6701298g0010 No alias PIP/PIPL precursor polypeptide 0.02 Archaeplastida
Zm00001e001819_P002 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e001820_P001 No alias amino acid transporter (LAT) 0.07 Archaeplastida
AMTR_s00048p00198660 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.APC... 0.02 LandPlants
Gb_41826 No alias amino acid transporter (LAT) 0.02 LandPlants
LOC_Os03g25920.1 No alias amino acid transporter (LAT) 0.02 LandPlants
MA_1524444g0010 No alias amino acid transporter (LAT) 0.01 LandPlants
MA_24651g0010 No alias amino acid transporter (LAT) 0.01 LandPlants
MA_42147g0010 No alias amino acid transporter (LAT) 0.01 LandPlants
Zm00001e001819_P002 No alias no hits & (original description: none) 0.06 LandPlants
Zm00001e001820_P001 No alias amino acid transporter (LAT) 0.07 LandPlants
MA_1524444g0010 No alias amino acid transporter (LAT) 0.01 SeedPlants
Zm00001e001819_P002 No alias no hits & (original description: none) 0.03 SeedPlants
Zm00001e001820_P001 No alias amino acid transporter (LAT) 0.04 SeedPlants

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 12 318
No external refs found!