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  5. AMTR_s00008p00253890

AMTR_s00008p00253890 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00008.195

Description : LysM domain-containing GPI-anchored protein 1 OS=Arabidopsis thaliana


Gene families : OG_01_0001821 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001821_tree ,
OG_02_0001339 (LandPlants) Phylogenetic Tree(s): OG_02_0001339_tree ,
OG_03_0003475 (SeedPlants) Phylogenetic Tree(s): OG_03_0003475_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00008p00253890
Cluster HCCA: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
AT1G21880 LYM1 lysm domain GPI-anchored protein 1 precursor 0.05 Archaeplastida
GSVIVT01008279001 No alias LysM domain-containing GPI-anchored protein 1... 0.05 Archaeplastida
GSVIVT01008882001 No alias LysM domain-containing GPI-anchored protein 1... 0.04 Archaeplastida
GSVIVT01023936001 No alias External stimuli response.biotic... 0.02 Archaeplastida
Gb_21712 No alias chitin receptor protein kinase (CEBiP) 0.02 Archaeplastida
LOC_Os02g53000.1 No alias LysM domain-containing GPI-anchored protein LYP6... 0.02 Archaeplastida
LOC_Os03g04110.1 No alias chitin receptor protein kinase (CEBiP) 0.03 Archaeplastida
LOC_Os06g10660.1 No alias LysM domain-containing GPI-anchored protein LYP6... 0.03 Archaeplastida
LOC_Os09g27890.1 No alias LysM domain-containing GPI-anchored protein LYP4... 0.06 Archaeplastida
LOC_Os09g37600.1 No alias chitin receptor protein kinase (CEBiP) 0.03 Archaeplastida
Mp5g22430.1 No alias chitin receptor protein kinase (CEBiP) 0.04 Archaeplastida
Smo89593 No alias LysM domain-containing GPI-anchored protein 1... 0.06 Archaeplastida
Solyc01g112080.3.1 No alias chitin receptor protein kinase (CEBiP) 0.09 Archaeplastida
Solyc11g012870.2.1 No alias LysM domain-containing GPI-anchored protein 1... 0.05 Archaeplastida
Zm00001e000277_P001 No alias chitin receptor protein kinase (CEBiP) 0.02 Archaeplastida
Zm00001e015978_P002 No alias LysM domain-containing GPI-anchored protein LYP6... 0.04 Archaeplastida
Zm00001e030792_P002 No alias LysM domain-containing GPI-anchored protein LYP6... 0.02 Archaeplastida
Zm00001e034324_P002 No alias LysM domain-containing GPI-anchored protein LYP4... 0.02 Archaeplastida
Zm00001e034935_P001 No alias chitin receptor protein kinase (CEBiP) 0.03 Archaeplastida
AT1G21880 LYM1 lysm domain GPI-anchored protein 1 precursor 0.02 LandPlants
GSVIVT01008279001 No alias LysM domain-containing GPI-anchored protein 1... 0.04 LandPlants
GSVIVT01008882001 No alias LysM domain-containing GPI-anchored protein 1... 0.04 LandPlants
GSVIVT01023936001 No alias External stimuli response.biotic... 0.02 LandPlants
LOC_Os02g53000.1 No alias LysM domain-containing GPI-anchored protein LYP6... 0.02 LandPlants
LOC_Os03g04110.1 No alias chitin receptor protein kinase (CEBiP) 0.02 LandPlants
LOC_Os06g10660.1 No alias LysM domain-containing GPI-anchored protein LYP6... 0.03 LandPlants
LOC_Os09g27890.1 No alias LysM domain-containing GPI-anchored protein LYP4... 0.03 LandPlants
LOC_Os09g37600.1 No alias chitin receptor protein kinase (CEBiP) 0.03 LandPlants
Mp5g22430.1 No alias chitin receptor protein kinase (CEBiP) 0.03 LandPlants
Smo89593 No alias LysM domain-containing GPI-anchored protein 1... 0.04 LandPlants
Solyc01g112080.3.1 No alias chitin receptor protein kinase (CEBiP) 0.08 LandPlants
Solyc11g012870.2.1 No alias LysM domain-containing GPI-anchored protein 1... 0.05 LandPlants
Zm00001e015978_P002 No alias LysM domain-containing GPI-anchored protein LYP6... 0.04 LandPlants
Zm00001e030792_P002 No alias LysM domain-containing GPI-anchored protein LYP6... 0.02 LandPlants
Zm00001e034324_P002 No alias LysM domain-containing GPI-anchored protein LYP4... 0.02 LandPlants
Zm00001e034935_P001 No alias chitin receptor protein kinase (CEBiP) 0.03 LandPlants
AT1G21880 LYM1 lysm domain GPI-anchored protein 1 precursor 0.02 SeedPlants
AT1G77630 No alias Peptidoglycan-binding LysM domain-containing protein 0.02 SeedPlants
GSVIVT01008882001 No alias LysM domain-containing GPI-anchored protein 1... 0.04 SeedPlants
LOC_Os09g27890.1 No alias LysM domain-containing GPI-anchored protein LYP4... 0.02 SeedPlants
Solyc11g012870.2.1 No alias LysM domain-containing GPI-anchored protein 1... 0.05 SeedPlants
Zm00001e015978_P002 No alias LysM domain-containing GPI-anchored protein LYP6... 0.04 SeedPlants

Type GO Term Name Evidence Source
BP GO:0016998 cell wall macromolecule catabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR018392 LysM_dom 180 222
IPR018392 LysM_dom 114 160
No external refs found!