AT1G57660


Description : Translation protein SH3-like family protein


Gene families : OG_01_0001742 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001742_tree ,
OG_02_0002541 (LandPlants) Phylogenetic Tree(s): OG_02_0002541_tree ,
OG_03_0002619 (SeedPlants) Phylogenetic Tree(s): OG_03_0002619_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G57660
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00252940 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.17 Archaeplastida
AMTR_s00024p00178920 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 Archaeplastida
Cpa|evm.model.tig00000640.5 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.18 Archaeplastida
Cre06.g278135 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.23 Archaeplastida
GSVIVT01001130001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 Archaeplastida
GSVIVT01033444001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 Archaeplastida
GSVIVT01033455001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 Archaeplastida
Gb_09077 No alias component RPL21 of LSU proteome component 0.08 Archaeplastida
LOC_Os03g04750.1 No alias component RPL21 of LSU proteome component 0.21 Archaeplastida
LOC_Os10g32820.1 No alias component RPL21 of LSU proteome component 0.11 Archaeplastida
MA_186351g0010 No alias component RPL21 of LSU proteome component 0.07 Archaeplastida
Mp6g01390.1 No alias component RPL21 of LSU proteome component 0.17 Archaeplastida
Pp3c12_9320V3.1 No alias Translation protein SH3-like family protein 0.18 Archaeplastida
Pp3c13_2360V3.1 No alias Translation protein SH3-like family protein 0.22 Archaeplastida
Pp3c3_5550V3.1 No alias Translation protein SH3-like family protein 0.26 Archaeplastida
Pp3c4_21520V3.1 No alias Translation protein SH3-like family protein 0.18 Archaeplastida
Smo170832 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
Solyc10g078960.2.1 No alias component RPL21 of LSU proteome component 0.21 Archaeplastida
Solyc10g080590.2.1 No alias component RPL21 of LSU proteome component 0.14 Archaeplastida
Zm00001e000341_P001 No alias component RPL21 of LSU proteome component 0.08 Archaeplastida
Zm00001e004623_P001 No alias component RPL21 of LSU proteome component 0.06 Archaeplastida
Zm00001e012727_P001 No alias component RPL21 of LSU proteome component 0.1 Archaeplastida
Zm00001e038963_P001 No alias component RPL21 of LSU proteome component 0.12 Archaeplastida
AMTR_s00016p00252940 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.16 LandPlants
AMTR_s00024p00178920 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 LandPlants
GSVIVT01033444001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 LandPlants
GSVIVT01033455001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.14 LandPlants
Gb_09077 No alias component RPL21 of LSU proteome component 0.07 LandPlants
LOC_Os03g04750.1 No alias component RPL21 of LSU proteome component 0.18 LandPlants
LOC_Os10g32820.1 No alias component RPL21 of LSU proteome component 0.1 LandPlants
MA_186351g0010 No alias component RPL21 of LSU proteome component 0.06 LandPlants
Mp6g01390.1 No alias component RPL21 of LSU proteome component 0.16 LandPlants
Pp3c12_9320V3.1 No alias Translation protein SH3-like family protein 0.17 LandPlants
Pp3c13_2360V3.1 No alias Translation protein SH3-like family protein 0.22 LandPlants
Pp3c3_5550V3.1 No alias Translation protein SH3-like family protein 0.23 LandPlants
Pp3c4_21520V3.1 No alias Translation protein SH3-like family protein 0.17 LandPlants
Smo170832 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 LandPlants
Solyc10g078960.2.1 No alias component RPL21 of LSU proteome component 0.19 LandPlants
Solyc10g080590.2.1 No alias component RPL21 of LSU proteome component 0.14 LandPlants
Zm00001e000341_P001 No alias component RPL21 of LSU proteome component 0.08 LandPlants
Zm00001e004623_P001 No alias component RPL21 of LSU proteome component 0.06 LandPlants
Zm00001e012727_P001 No alias component RPL21 of LSU proteome component 0.1 LandPlants
Zm00001e038963_P001 No alias component RPL21 of LSU proteome component 0.12 LandPlants
AMTR_s00016p00252940 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.15 SeedPlants
AMTR_s00024p00178920 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.11 SeedPlants
GSVIVT01033444001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 SeedPlants
GSVIVT01033455001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.12 SeedPlants
Gb_09077 No alias component RPL21 of LSU proteome component 0.06 SeedPlants
LOC_Os03g04750.1 No alias component RPL21 of LSU proteome component 0.18 SeedPlants
LOC_Os10g32820.1 No alias component RPL21 of LSU proteome component 0.1 SeedPlants
MA_186351g0010 No alias component RPL21 of LSU proteome component 0.06 SeedPlants
Solyc10g078960.2.1 No alias component RPL21 of LSU proteome component 0.18 SeedPlants
Solyc10g080590.2.1 No alias component RPL21 of LSU proteome component 0.14 SeedPlants
Zm00001e000341_P001 No alias component RPL21 of LSU proteome component 0.08 SeedPlants
Zm00001e004623_P001 No alias component RPL21 of LSU proteome component 0.05 SeedPlants
Zm00001e012727_P001 No alias component RPL21 of LSU proteome component 0.08 SeedPlants
Zm00001e038963_P001 No alias component RPL21 of LSU proteome component 0.1 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005840 ribosome ISS Interproscan
BP GO:0006412 translation ISS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001147 Ribosomal_L21e 1 101
No external refs found!