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  5. AT1G56020

AT1G56020


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12970.1); Has 3011 Blast hits to 958 proteins in 192 species: Archae - 0; Bacteria - 193; Metazoa - 479; Fungi - 286; Plants - 158; Viruses - 8; Other Eukaryotes - 1887 (source: NCBI BLink).


Gene families : OG_01_0003394 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003394_tree ,
OG_02_0002334 (LandPlants) Phylogenetic Tree(s): OG_02_0002334_tree ,
OG_03_0002058 (SeedPlants) Phylogenetic Tree(s): OG_03_0002058_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G56020
Cluster HCCA: Cluster_80

Target Alias Description ECC score Gene Family Method Actions
AT3G12970 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 Archaeplastida
LOC_Os04g52800.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e025161_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e030336_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
AT3G12970 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 LandPlants
LOC_Os04g52800.1 No alias no hits & (original description: none) 0.02 LandPlants
LOC_Os12g41660.1 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e025161_P001 No alias no hits & (original description: none) 0.04 LandPlants
Zm00001e030336_P001 No alias no hits & (original description: none) 0.03 LandPlants
AT3G12970 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 SeedPlants
Zm00001e025161_P001 No alias no hits & (original description: none) 0.03 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!