AT1G55370 (NDF5)

Aliases : NDF5

Description : NDH-dependent cyclic electron flow 5

Gene families : OG_01_0006741 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006741_tree ,
OG_02_0005508 (LandPlants) Phylogenetic Tree(s): OG_02_0005508_tree ,
OG_03_0012037 (SeedPlants) Phylogenetic Tree(s): OG_03_0012037_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G55370
Cluster	HCCA: Cluster_116

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00004p00079400	evm_27.TU.AmTr_v1...	Photosynthesis.photophosphorylation.chlororespiration.NAD...	0.05	Archaeplastida
GSVIVT01033392001	No alias	Photosynthesis.photophosphorylation.chlororespiration.NAD...	0.07	Archaeplastida
GSVIVT01033393001	No alias	Photosynthesis.photophosphorylation.chlororespiration.NAD...	0.08	Archaeplastida
LOC_Os03g06230.1	No alias	component PnsB2/NDF2 of NDH subcomplex B	0.06	Archaeplastida
LOC_Os03g53710.1	No alias	assembly factor NDF5 involved in NDH complex assembly	0.04	Archaeplastida
Solyc03g062710.4.1	No alias	assembly factor NDF5 involved in NDH complex assembly	0.09	Archaeplastida
Solyc03g062720.3.1	No alias	component PnsB2/NDF2 of NDH subcomplex B	0.07	Archaeplastida
Zm00001e005670_P001	No alias	assembly factor NDF5 involved in NDH complex assembly	0.04	Archaeplastida
AMTR_s00004p00079400	evm_27.TU.AmTr_v1...	Photosynthesis.photophosphorylation.chlororespiration.NAD...	0.04	LandPlants
GSVIVT01033392001	No alias	Photosynthesis.photophosphorylation.chlororespiration.NAD...	0.04	LandPlants
GSVIVT01033393001	No alias	Photosynthesis.photophosphorylation.chlororespiration.NAD...	0.07	LandPlants
LOC_Os03g06230.1	No alias	component PnsB2/NDF2 of NDH subcomplex B	0.06	LandPlants
LOC_Os03g53710.1	No alias	assembly factor NDF5 involved in NDH complex assembly	0.02	LandPlants
Pp3c25_5270V3.1	No alias	NDH-dependent cyclic electron flow 5	0.02	LandPlants
Solyc03g062710.4.1	No alias	assembly factor NDF5 involved in NDH complex assembly	0.07	LandPlants
Solyc03g062720.3.1	No alias	component PnsB2/NDF2 of NDH subcomplex B	0.06	LandPlants
Zm00001e005670_P001	No alias	assembly factor NDF5 involved in NDH complex assembly	0.03	LandPlants
AMTR_s00004p00079400	evm_27.TU.AmTr_v1...	Photosynthesis.photophosphorylation.chlororespiration.NAD...	0.03	SeedPlants
GSVIVT01033392001	No alias	Photosynthesis.photophosphorylation.chlororespiration.NAD...	0.04	SeedPlants
LOC_Os03g53710.1	No alias	assembly factor NDF5 involved in NDH complex assembly	0.01	SeedPlants
Solyc03g062710.4.1	No alias	assembly factor NDF5 involved in NDH complex assembly	0.06	SeedPlants
Zm00001e005670_P001	No alias	assembly factor NDF5 involved in NDH complex assembly	0.03	SeedPlants

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
BP	GO:0006091	generation of precursor metabolites and energy	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009451	RNA modification	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009767	photosynthetic electron transport chain	None	Extended
BP	GO:0009773	photosynthetic electron transport in photosystem I	IMP	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009965	leaf morphogenesis	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0010628	positive regulation of gene expression	IMP	Interproscan
CC	GO:0016020	membrane	IDA	Interproscan
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
BP	GO:0016556	mRNA modification	RCA	Interproscan
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022900	electron transport chain	None	Extended
BP	GO:0030154	cell differentiation	RCA	Interproscan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0045893	positive regulation of transcription, DNA-templated	RCA	Interproscan
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1905392	plant organ morphogenesis	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

External Links

No external refs found!

AT1G55370 (NDF5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation