AT1G55350 (EMB80, EMB1275, DEK1, ATDEK1)

Aliases : EMB80, EMB1275, DEK1, ATDEK1

Description : calpain-type cysteine protease family

Gene families : OG_01_0002400 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002400_tree ,
OG_02_0007273 (LandPlants) Phylogenetic Tree(s): OG_02_0007273_tree ,
OG_03_0009990 (SeedPlants) Phylogenetic Tree(s): OG_03_0009990_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G55350
Cluster	HCCA: Cluster_120

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00047p00125370	evm_27.TU.AmTr_v1...	Protein degradation.peptidase families.cysteine-type...	0.1	Archaeplastida
GSVIVT01025470001	No alias	Protein degradation.peptidase families.cysteine-type...	0.15	Archaeplastida
Gb_09128	No alias	calcium-activated protease (Phytocalpain)	0.05	Archaeplastida
MA_129368g0010	No alias	calcium-activated protease (Phytocalpain)	0.06	Archaeplastida
MA_8967622g0010	No alias	Calpain-type cysteine protease DEK1 OS=Arabidopsis...	0.04	Archaeplastida
Mp2g12820.1	No alias	calcium-activated protease (Phytocalpain)	0.07	Archaeplastida
Pp3c17_17550V3.1	No alias	calpain-type cysteine protease family	0.05	Archaeplastida
Smo235391	No alias	Protein degradation.peptidase families.cysteine-type...	0.1	Archaeplastida
Smo236021	No alias	Protein degradation.peptidase families.cysteine-type...	0.09	Archaeplastida
Solyc12g100360.1.1	No alias	calcium-activated protease (Phytocalpain)	0.17	Archaeplastida
Zm00001e001376_P002	No alias	calcium-activated protease (Phytocalpain)	0.18	Archaeplastida
AMTR_s00047p00125370	evm_27.TU.AmTr_v1...	Protein degradation.peptidase families.cysteine-type...	0.09	LandPlants
GSVIVT01025470001	No alias	Protein degradation.peptidase families.cysteine-type...	0.16	LandPlants
Gb_09128	No alias	calcium-activated protease (Phytocalpain)	0.04	LandPlants
LOC_Os02g47970.1	No alias	calcium-activated protease (Phytocalpain)	0.02	LandPlants
MA_129368g0010	No alias	calcium-activated protease (Phytocalpain)	0.05	LandPlants
Mp2g12820.1	No alias	calcium-activated protease (Phytocalpain)	0.07	LandPlants
Pp3c17_17550V3.1	No alias	calpain-type cysteine protease family	0.05	LandPlants
Smo235391	No alias	Protein degradation.peptidase families.cysteine-type...	0.08	LandPlants
Smo236021	No alias	Protein degradation.peptidase families.cysteine-type...	0.08	LandPlants
Solyc12g100360.1.1	No alias	calcium-activated protease (Phytocalpain)	0.18	LandPlants
Zm00001e001376_P002	No alias	calcium-activated protease (Phytocalpain)	0.15	LandPlants
AMTR_s00047p00125370	evm_27.TU.AmTr_v1...	Protein degradation.peptidase families.cysteine-type...	0.09	SeedPlants
GSVIVT01025470001	No alias	Protein degradation.peptidase families.cysteine-type...	0.14	SeedPlants
Gb_09128	No alias	calcium-activated protease (Phytocalpain)	0.04	SeedPlants
LOC_Os02g47970.1	No alias	calcium-activated protease (Phytocalpain)	0.02	SeedPlants
MA_129368g0010	No alias	calcium-activated protease (Phytocalpain)	0.05	SeedPlants
Solyc12g100360.1.1	No alias	calcium-activated protease (Phytocalpain)	0.16	SeedPlants
Zm00001e001376_P002	No alias	calcium-activated protease (Phytocalpain)	0.15	SeedPlants

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0001708	cell fate specification	IMP	Interproscan
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004197	cysteine-type endopeptidase activity	IDA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005737	cytoplasm	IDA	Interproscan
CC	GO:0005783	endoplasmic reticulum	IDA	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007015	actin filament organization	None	Extended
BP	GO:0007062	sister chromatid cohesion	RCA	Interproscan
BP	GO:0007155	cell adhesion	RCA	Interproscan
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008064	regulation of actin polymerization or depolymerization	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009793	embryo development ending in seed dormancy	IMP	Interproscan
BP	GO:0009793	embryo development ending in seed dormancy	RCA	Interproscan
BP	GO:0009793	embryo development ending in seed dormancy	NAS	Interproscan
BP	GO:0009880	embryonic pattern specification	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010014	meristem initiation	None	Extended
BP	GO:0010053	root epidermal cell differentiation	None	Extended
BP	GO:0010072	primary shoot apical meristem specification	RCA	Interproscan
BP	GO:0010090	trichome morphogenesis	RCA	Interproscan
BP	GO:0010228	vegetative to reproductive phase transition of meristem	RCA	Interproscan
BP	GO:0010431	seed maturation	RCA	Interproscan
BP	GO:0010638	positive regulation of organelle organization	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0021700	developmental maturation	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0022610	biological adhesion	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0030832	regulation of actin filament length	None	Extended
BP	GO:0030833	regulation of actin filament polymerization	None	Extended
BP	GO:0030838	positive regulation of actin filament polymerization	None	Extended
BP	GO:0031334	positive regulation of protein-containing complex assembly	None	Extended
BP	GO:0032271	regulation of protein polymerization	None	Extended
BP	GO:0032273	positive regulation of protein polymerization	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032535	regulation of cellular component size	None	Extended
BP	GO:0032956	regulation of actin cytoskeleton organization	None	Extended
BP	GO:0032970	regulation of actin filament-based process	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0040014	regulation of multicellular organism growth	IMP	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043254	regulation of protein-containing complex assembly	None	Extended
BP	GO:0044087	regulation of cellular component biogenesis	None	Extended
BP	GO:0044089	positive regulation of cellular component biogenesis	None	Extended
BP	GO:0045010	actin nucleation	RCA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0045595	regulation of cell differentiation	RCA	Interproscan
BP	GO:0048469	cell maturation	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048609	multicellular organismal reproductive process	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0048764	trichoblast maturation	None	Extended
BP	GO:0048765	root hair cell differentiation	RCA	Interproscan
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051130	positive regulation of cellular component organization	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051276	chromosome organization	None	Extended
BP	GO:0051301	cell division	RCA	Interproscan
BP	GO:0051493	regulation of cytoskeleton organization	None	Extended
BP	GO:0051495	positive regulation of cytoskeleton organization	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	RCA	Interproscan
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090066	regulation of anatomical structure size	None	Extended
BP	GO:0090421	embryonic meristem initiation	None	Extended
BP	GO:0090627	plant epidermal cell differentiation	None	Extended
BP	GO:0097435	supramolecular fiber organization	None	Extended
BP	GO:0110053	regulation of actin filament organization	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1902903	regulation of supramolecular fiber organization	None	Extended
BP	GO:1902905	positive regulation of supramolecular fiber organization	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR022682	Calpain_domain_III	2007	2144
IPR001300	Peptidase_C2_calpain_cat	1696	1995

External Links

No external refs found!

AT1G55350 (EMB80, EMB1275, DEK1, ATDEK1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation