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  5. AT1G54200

AT1G54200


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13980.1); Has 1084 Blast hits to 581 proteins in 136 species: Archae - 0; Bacteria - 72; Metazoa - 212; Fungi - 78; Plants - 102; Viruses - 0; Other Eukaryotes - 620 (source: NCBI BLink).


Gene families : OG_01_0006119 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006119_tree ,
OG_02_0004162 (LandPlants) Phylogenetic Tree(s): OG_02_0004162_tree ,
OG_03_0002654 (SeedPlants) Phylogenetic Tree(s): OG_03_0002654_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G54200
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
MA_100548g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_464588g0010 No alias Protein BIG GRAIN 1-like A OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_63144g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_67269g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_86183g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc08g062180.3.1 No alias Protein BIG GRAIN 1-like B OS=Arabidopsis thaliana... 0.03 Archaeplastida
GSVIVT01016780001 No alias Protein BIG GRAIN 1-like B OS=Arabidopsis thaliana 0.02 LandPlants
MA_100548g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_464588g0010 No alias Protein BIG GRAIN 1-like A OS=Arabidopsis thaliana... 0.02 LandPlants
MA_63144g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_67269g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_75641g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_86183g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_9563494g0010 No alias no hits & (original description: none) 0.02 LandPlants
Solyc08g062180.3.1 No alias Protein BIG GRAIN 1-like B OS=Arabidopsis thaliana... 0.03 LandPlants
Solyc08g062180.3.1 No alias Protein BIG GRAIN 1-like B OS=Arabidopsis thaliana... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0009855 determination of bilateral symmetry RCA Interproscan
BP GO:0009944 polarity specification of adaxial/abaxial axis RCA Interproscan
BP GO:0010014 meristem initiation RCA Interproscan
BP GO:0010075 regulation of meristem growth RCA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!