Cre07.g318702


Description : 27.1 RNA.processing This gene is predicted to encode a protein with a DWD motif. It can bind to DDB1a in Y2H assays and may be involved in the formation of a CUL4-based E3 ubiquitin ligase nucleotide bindingprotein binding


Gene families : OG_01_0007120 (Gene family) Phylogenetic Tree(s): OG0007120_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cre07.g318702
Cluster HCCA cluster: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AT4G28450 No alias nucleotide binding;protein binding 0.06 Gene family
Cpa|evm.model.tig00000615.67 No alias 27.1 RNA.processing This gene is predicted to encode a... 0.06 Gene family
GSVIVT01020601001 No alias 27.1 RNA.processing This gene is predicted to encode a... 0.09 Gene family
Solyc07g053660.3.1 Solyc07g053660.3 27.1 RNA.processing This gene is predicted to encode a... 0.06 Gene family
Zm00001d034883 GRMZM2G590033 27.1 RNA.processing This gene is predicted to encode a... 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 100 136
IPR001680 WD40_repeat 279 313
IPR001680 WD40_repeat 321 357
IPR001680 WD40_repeat 64 94
IPR007287 Sof1 358 444
No external refs found!