AT1G53800


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53250.1); Has 1136 Blast hits to 882 proteins in 242 species: Archae - 2; Bacteria - 216; Metazoa - 257; Fungi - 77; Plants - 87; Viruses - 4; Other Eukaryotes - 493 (source: NCBI BLink).


Gene families : OG_01_0002257 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002257_tree ,
OG_02_0001830 (LandPlants) Phylogenetic Tree(s): OG_02_0001830_tree ,
OG_03_0004835 (SeedPlants) Phylogenetic Tree(s): OG_03_0004835_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G53800
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00147p00104660 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
GSVIVT01014224001 No alias No description available 0.06 Archaeplastida
GSVIVT01016660001 No alias No description available 0.07 Archaeplastida
Gb_18962 No alias no hits & (original description: none) 0.07 Archaeplastida
Gb_21386 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os10g12354.1 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_495939g0010 No alias no hits & (original description: none) 0.09 Archaeplastida
MA_643462g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_934860g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Mp6g14930.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Pp3c20_11380V3.1 No alias No annotation 0.14 Archaeplastida
Pp3c23_5090V3.1 No alias No annotation 0.07 Archaeplastida
Smo439642 No alias No description available 0.05 Archaeplastida
Solyc03g123700.4.1 No alias no hits & (original description: none) 0.16 Archaeplastida
Solyc12g014220.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e006550_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e032593_P001 No alias no hits & (original description: none) 0.1 Archaeplastida
AMTR_s00147p00104660 evm_27.TU.AmTr_v1... No description available 0.05 LandPlants
GSVIVT01014224001 No alias No description available 0.05 LandPlants
GSVIVT01016660001 No alias No description available 0.07 LandPlants
Gb_18962 No alias no hits & (original description: none) 0.06 LandPlants
LOC_Os10g12354.1 No alias no hits & (original description: none) 0.07 LandPlants
MA_495939g0010 No alias no hits & (original description: none) 0.07 LandPlants
MA_643462g0010 No alias no hits & (original description: none) 0.06 LandPlants
MA_934860g0010 No alias no hits & (original description: none) 0.01 LandPlants
Mp6g14930.1 No alias no hits & (original description: none) 0.05 LandPlants
Pp3c20_11380V3.1 No alias No annotation 0.12 LandPlants
Pp3c23_5090V3.1 No alias No annotation 0.07 LandPlants
Smo439642 No alias No description available 0.04 LandPlants
Solyc03g123700.4.1 No alias no hits & (original description: none) 0.15 LandPlants
Solyc12g014220.3.1 No alias no hits & (original description: none) 0.04 LandPlants
Zm00001e006550_P001 No alias no hits & (original description: none) 0.04 LandPlants
Zm00001e032593_P001 No alias no hits & (original description: none) 0.09 LandPlants
AMTR_s00147p00104660 evm_27.TU.AmTr_v1... No description available 0.04 SeedPlants
GSVIVT01016660001 No alias No description available 0.07 SeedPlants
Gb_18962 No alias no hits & (original description: none) 0.05 SeedPlants
Gb_24726 No alias no hits & (original description: none) 0.02 SeedPlants
LOC_Os10g12354.1 No alias no hits & (original description: none) 0.07 SeedPlants
MA_643462g0010 No alias no hits & (original description: none) 0.05 SeedPlants
Solyc03g123700.4.1 No alias no hits & (original description: none) 0.14 SeedPlants
Zm00001e006550_P001 No alias no hits & (original description: none) 0.05 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003611 NUMOD3 111 137
No external refs found!