AT1G52830 (SHY1, IAA6)

Aliases : SHY1, IAA6

Description : indole-3-acetic acid 6

Gene families : OG_01_0000129 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000129_tree ,
OG_02_0000051 (LandPlants) Phylogenetic Tree(s): OG_02_0000051_tree ,
OG_03_0016993 (SeedPlants) Phylogenetic Tree(s): OG_03_0016993_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G52830
Cluster	HCCA: Cluster_306

Target	Alias	Description	ECC score	Gene Family Method
AT1G04550	IAA12, BDL	AUX/IAA transcriptional regulator family protein	0.04	Archaeplastida
AT1G15580	ATAUX2-27, AUX2-27, IAA5	indole-3-acetic acid inducible 5	0.05	Archaeplastida
AT3G15540	MSG2, IAA19	indole-3-acetic acid inducible 19	0.04	Archaeplastida
AT3G16500	PAP1, IAA26	phytochrome-associated protein 1	0.07	Archaeplastida
AT3G62100	IAA30	indole-3-acetic acid inducible 30	0.04	Archaeplastida
AT4G14560	IAA1, AXR5	indole-3-acetic acid inducible	0.04	Archaeplastida
AT4G28640	IAA11	indole-3-acetic acid inducible 11	0.03	Archaeplastida
AT5G25890	IAA28, IAR2	indole-3-acetic acid inducible 28	0.04	Archaeplastida
GSVIVT01000720001	No alias	Auxin-induced protein 22D OS=Vigna radiata var. radiata	0.04	Archaeplastida
GSVIVT01015449001	No alias	Auxin-responsive protein IAA17 OS=Arabidopsis thaliana	0.04	Archaeplastida
GSVIVT01017158001	No alias	Auxin-induced protein AUX22 OS=Glycine max	0.04	Archaeplastida
GSVIVT01028242001	No alias	Auxin-responsive protein IAA4 OS=Oryza sativa subsp. indica	0.04	Archaeplastida
LOC_Os03g43400.1	No alias	Auxin-responsive protein IAA11 OS=Oryza sativa subsp....	0.02	Archaeplastida
LOC_Os06g07040.1	No alias	Auxin-responsive protein IAA20 OS=Oryza sativa subsp....	0.03	Archaeplastida
LOC_Os06g22870.1	No alias	Auxin-responsive protein IAA21 OS=Oryza sativa subsp....	0.03	Archaeplastida
LOC_Os06g39590.1	No alias	Auxin-responsive protein IAA23 OS=Oryza sativa subsp....	0.04	Archaeplastida
LOC_Os12g40900.1	No alias	Auxin-responsive protein IAA31 OS=Oryza sativa subsp....	0.02	Archaeplastida
Smo85035	No alias	Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica	0.02	Archaeplastida
Zm00001e012059_P002	No alias	Auxin-responsive protein IAA13 OS=Oryza sativa subsp....	0.03	Archaeplastida
Zm00001e017434_P002	No alias	Auxin-responsive protein IAA4 OS=Oryza sativa subsp....	0.02	Archaeplastida
Zm00001e023600_P003	No alias	Auxin-responsive protein IAA10 OS=Oryza sativa subsp....	0.04	Archaeplastida
Zm00001e032955_P001	No alias	Auxin-responsive protein IAA24 OS=Oryza sativa subsp....	0.04	Archaeplastida
AT1G04550	IAA12, BDL	AUX/IAA transcriptional regulator family protein	0.04	LandPlants
AT1G15580	ATAUX2-27, AUX2-27, IAA5	indole-3-acetic acid inducible 5	0.03	LandPlants
AT3G15540	MSG2, IAA19	indole-3-acetic acid inducible 19	0.04	LandPlants
AT3G16500	PAP1, IAA26	phytochrome-associated protein 1	0.06	LandPlants
AT3G62100	IAA30	indole-3-acetic acid inducible 30	0.04	LandPlants
AT4G14560	IAA1, AXR5	indole-3-acetic acid inducible	0.03	LandPlants
GSVIVT01000720001	No alias	Auxin-induced protein 22D OS=Vigna radiata var. radiata	0.03	LandPlants
GSVIVT01015449001	No alias	Auxin-responsive protein IAA17 OS=Arabidopsis thaliana	0.04	LandPlants
Solyc03g120380.3.1	No alias	Auxin-induced protein AUX22 OS=Glycine max...	0.03	LandPlants
Solyc09g065850.4.1	No alias	Auxin-induced protein 22D OS=Vigna radiata var. radiata...	0.02	LandPlants
Zm00001e019860_P001	No alias	repressor component Aux/IAA of auxin receptor complex	0.02	LandPlants
Zm00001e032955_P001	No alias	Auxin-responsive protein IAA24 OS=Oryza sativa subsp....	0.03	LandPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009704	de-etiolation	IMP	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IMP	Interproscan
BP	GO:0009733	response to auxin	IEP	Interproscan
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR033389	AUX/IAA_dom	31	184

External Links

No external refs found!

AT1G52830 (SHY1, IAA6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation