AT1G52730


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0003820 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003820_tree ,
OG_02_0003826 (LandPlants) Phylogenetic Tree(s): OG_02_0003826_tree ,
OG_03_0004128 (SeedPlants) Phylogenetic Tree(s): OG_03_0004128_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G52730
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000194.58 No alias Eukaryotic translation initiation factor 3 subunit I... 0.02 Archaeplastida
GSVIVT01015473001 No alias Eukaryotic translation initiation factor 3 subunit I... 0.03 Archaeplastida
Pp3c26_8130V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Archaeplastida
Pp3c26_8130V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.02 LandPlants

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex ISS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 94 130
IPR001680 WD40_repeat 263 297
IPR001680 WD40_repeat 179 214
IPR001680 WD40_repeat 54 89
No external refs found!