AT1G52280 (AtRABG3d, RABG3d)


Aliases : AtRABG3d, RABG3d

Description : RAB GTPase homolog G3D


Gene families : OG_01_0001137 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001137_tree ,
OG_02_0000971 (LandPlants) Phylogenetic Tree(s): OG_02_0000971_tree ,
OG_03_0000847 (SeedPlants) Phylogenetic Tree(s): OG_03_0000847_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G52280
Cluster HCCA: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00072050 evm_27.TU.AmTr_v1... Vesicle trafficking.regulation of membrane tethering and... 0.06 Archaeplastida
LOC_Os01g12730.1 No alias G-class RAB GTPase 0.03 Archaeplastida
Solyc03g120750.3.1 No alias G-class RAB GTPase 0.04 Archaeplastida
Zm00001e032146_P002 No alias G-class RAB GTPase 0.04 Archaeplastida
AMTR_s00059p00072050 evm_27.TU.AmTr_v1... Vesicle trafficking.regulation of membrane tethering and... 0.06 LandPlants
LOC_Os01g12730.1 No alias G-class RAB GTPase 0.03 LandPlants
Solyc03g120750.3.1 No alias G-class RAB GTPase 0.04 LandPlants
Zm00001e032146_P002 No alias G-class RAB GTPase 0.04 LandPlants
AMTR_s00059p00072050 evm_27.TU.AmTr_v1... Vesicle trafficking.regulation of membrane tethering and... 0.06 SeedPlants
LOC_Os01g12730.1 No alias G-class RAB GTPase 0.03 SeedPlants
MA_18050g0020 No alias Ras-related protein Rab7 OS=Gossypium hirsutum... 0.01 SeedPlants
Solyc03g120750.3.1 No alias G-class RAB GTPase 0.04 SeedPlants
Zm00001e032146_P002 No alias G-class RAB GTPase 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding ISS Interproscan
CC GO:0005773 vacuole IDA Interproscan
CC GO:0005774 vacuolar membrane IDA Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0016192 vesicle-mediated transport RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001806 Small_GTPase 10 176
No external refs found!