Cre06.g307450


Description : 27.1 RNA.processing SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein


Gene families : OG_01_0003922 (Gene family) Phylogenetic Tree(s): OG0003922_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cre06.g307450
Cluster HCCA cluster: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
AT1G14640 No alias SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 0.01 Gene family
AT1G14650 No alias SWAP (Suppressor-of-White-APricot)/surp... 0.05 Gene family
Cpa|evm.model.tig00021501.12 No alias 27.1 RNA.processing SWAP... 0.05 Gene family
GSVIVT01012058001 No alias 27.1 RNA.processing SWAP... 0.02 Gene family
LOC_Os02g14780 Os02g0245000 27.1 RNA.processing SWAP... 0.02 Gene family
MA_10432431g0010 No alias 27.1 RNA.processing SWAP... 0.02 Gene family
Smo146605 PACid_15403332 27.1 RNA.processing SWAP... 0.02 Gene family
Smo33215 PACid_15421118 27.1 RNA.processing SWAP... 0.01 Gene family
Solyc02g081960.3.1 Solyc02g081960.3 27.1 RNA.processing SWAP... 0.07 Gene family
Solyc04g005690.3.1 Solyc04g005690.3 27.1 RNA.processing SWAP... 0.07 Gene family
Zm00001d008293 GRMZM2G028156 27.1 RNA.processing SWAP... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000061 Surp 66 115
IPR000061 Surp 181 232
IPR000626 Ubiquitin_dom 795 851
IPR022030 SF3A1 250 498
No external refs found!