Smo438000


Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.BBX/CONSTANS transcription factor


Gene families : OG_01_0000884 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000884_tree ,
OG_02_0000594 (LandPlants) Phylogenetic Tree(s): OG_02_0000594_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo438000
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00156240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AT1G73870 No alias B-box type zinc finger protein with CCT domain 0.02 Archaeplastida
GSVIVT01003983001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
Gb_02486 No alias transcription factor (BBX-CO) 0.02 Archaeplastida
LOC_Os03g50310.1 No alias transcription factor (BBX-CO) 0.02 Archaeplastida
MA_1925779g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_470965g0010 No alias transcription factor (BBX-CO) 0.02 Archaeplastida
MA_91504g0010 No alias transcription factor (BBX-CO) 0.02 Archaeplastida
MA_96860g0010 No alias transcription factor (BBX-CO) 0.05 Archaeplastida
Pp3c2_35540V3.1 No alias B-box type zinc finger protein with CCT domain 0.05 Archaeplastida
Solyc04g007210.3.1 No alias transcription factor (BBX-CO) 0.02 Archaeplastida
AMTR_s00025p00156240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 LandPlants
AMTR_s00073p00061640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 LandPlants
AT1G73870 No alias B-box type zinc finger protein with CCT domain 0.02 LandPlants
LOC_Os03g50310.1 No alias transcription factor (BBX-CO) 0.02 LandPlants
MA_1925779g0010 No alias no hits & (original description: none) 0.04 LandPlants
MA_470965g0010 No alias transcription factor (BBX-CO) 0.02 LandPlants
MA_91504g0010 No alias transcription factor (BBX-CO) 0.02 LandPlants
MA_96860g0010 No alias transcription factor (BBX-CO) 0.03 LandPlants
Pp3c2_35540V3.1 No alias B-box type zinc finger protein with CCT domain 0.01 LandPlants
Solyc04g007210.3.1 No alias transcription factor (BBX-CO) 0.02 LandPlants

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000315 Znf_B-box 27 67
No external refs found!