AT1G51400


Description : Photosystem II 5 kD protein


Gene families : OG_01_0009114 (Archaeplastida) Phylogenetic Tree(s): OG_01_0009114_tree ,
OG_02_0009372 (LandPlants) Phylogenetic Tree(s): OG_02_0009372_tree ,
OG_03_0009286 (SeedPlants) Phylogenetic Tree(s): OG_03_0009286_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G51400
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00148610 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.16 Archaeplastida
LOC_Os02g37060.1 No alias component PsbTn of PS-II complex 0.06 Archaeplastida
MA_17217g0020 No alias component PsbTn of PS-II complex 0.08 Archaeplastida
Mp7g16030.1 No alias component PsbTn of PS-II complex 0.25 Archaeplastida
Pp3c5_640V3.1 No alias photosystem II subunit T 0.07 Archaeplastida
Pp3c5_690V3.1 No alias Photosystem II 5 kD protein 0.13 Archaeplastida
Zm00001e014943_P001 No alias component PsbTn of PS-II complex 0.1 Archaeplastida
AMTR_s00032p00148610 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.17 LandPlants
LOC_Os02g37060.1 No alias component PsbTn of PS-II complex 0.07 LandPlants
MA_17217g0020 No alias component PsbTn of PS-II complex 0.08 LandPlants
Mp7g16030.1 No alias component PsbTn of PS-II complex 0.29 LandPlants
Pp3c5_640V3.1 No alias photosystem II subunit T 0.06 LandPlants
Pp3c5_690V3.1 No alias Photosystem II 5 kD protein 0.17 LandPlants
Zm00001e014943_P001 No alias component PsbTn of PS-II complex 0.08 LandPlants
AMTR_s00032p00148610 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.19 SeedPlants
LOC_Os02g37060.1 No alias component PsbTn of PS-II complex 0.07 SeedPlants
MA_17217g0020 No alias component PsbTn of PS-II complex 0.07 SeedPlants
Zm00001e014943_P001 No alias component PsbTn of PS-II complex 0.08 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009535 chloroplast thylakoid membrane IDA Interproscan
CC GO:0009543 chloroplast thylakoid lumen ISS Interproscan
BP GO:0009611 response to wounding IEP Interproscan
BP GO:0010193 response to ozone IEP Interproscan
BP GO:0010224 response to UV-B IEP Interproscan
CC GO:0030095 chloroplast photosystem II ISS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!