Cre06.g304300


Description : 29.5.11.20 protein.degradation.ubiquitin.proteasom encodes a protein with extensive homology to the largest subunit of the multicatalytic proteinase complex (proteasome). Negatively regulates thiol biosynthesis and arsenic tolerance. proteasome alpha subunit F1 (PAF1)


Gene families : OG_01_0004488 (Gene family) Phylogenetic Tree(s): OG0004488_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cre06.g304300
Cluster HCCA cluster: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AT1G47250 PAF2 20S proteasome alpha subunit F2 0.06 Gene family
AT5G42790 ARS5, PAF1, ATPSM30 proteasome alpha subunit F1 0.02 Gene family
Cpa|evm.model.tig00000217.21 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.11 Gene family
GSVIVT01009737001 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.04 Gene family
LOC_Os02g04100 Os02g0133800 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.01 Gene family
Smo158876 PACid_15418147 No description available 0.04 Gene family
Solyc04g080590.3.1 Solyc04g080590.3 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.1 Gene family
Zm00001d015180 No alias 29.5.11.20 protein.degradation.ubiquitin.proteasom... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA InterProScan
CC GO:0005839 proteasome core complex IEA InterProScan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 4 189
No external refs found!