AT1G50010 (TUA2)


Aliases : TUA2

Description : tubulin alpha-2 chain


Gene families : OG_01_0000426 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000426_tree ,
OG_02_0000313 (LandPlants) Phylogenetic Tree(s): OG_02_0000313_tree ,
OG_03_0000596 (SeedPlants) Phylogenetic Tree(s): OG_03_0000596_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G50010
Cluster HCCA: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00112490 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.05 Archaeplastida
Cre03.g190950 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
Cre04.g216850 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
GSVIVT01011382001 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.04 Archaeplastida
GSVIVT01025462001 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.05 Archaeplastida
Gb_00907 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.05 Archaeplastida
Gb_02715 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Gb_07962 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
LOC_Os03g51600.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Archaeplastida
LOC_Os07g38730.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.08 Archaeplastida
LOC_Os11g14220.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Archaeplastida
MA_184192g0010 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Archaeplastida
MA_273360g0010 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.05 Archaeplastida
Mp2g23500.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.05 Archaeplastida
Mp4g00550.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
Pp3c14_17800V3.1 No alias tubulin alpha-2 chain 0.02 Archaeplastida
Pp3c4_2000V3.1 No alias tubulin alpha-2 chain 0.02 Archaeplastida
Smo100162 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
Smo178975 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.04 Archaeplastida
Smo405729 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 Archaeplastida
Solyc02g087880.3.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.05 Archaeplastida
Solyc08g006890.3.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
Zm00001e005536_P001 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Archaeplastida
Zm00001e005537_P001 No alias Tubulin alpha-1 chain OS=Zea mays (sp|p14640|tba1_maize : 353.0) 0.05 Archaeplastida
Zm00001e011939_P002 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Archaeplastida
Zm00001e012118_P001 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Zm00001e035332_P001 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Archaeplastida
AMTR_s00033p00112490 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.05 LandPlants
GSVIVT01009258001 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 LandPlants
GSVIVT01025462001 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.05 LandPlants
Gb_00907 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.05 LandPlants
Gb_02715 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 LandPlants
Gb_07962 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 LandPlants
LOC_Os03g51600.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.04 LandPlants
LOC_Os07g38730.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.05 LandPlants
LOC_Os11g14220.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.04 LandPlants
MA_184192g0010 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 LandPlants
Mp1g24530.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 LandPlants
Mp2g23500.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.04 LandPlants
Mp4g00550.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 LandPlants
Pp3c14_17800V3.1 No alias tubulin alpha-2 chain 0.02 LandPlants
Pp3c16_6220V3.1 No alias tubulin alpha-3 0.02 LandPlants
Pp3c25_1010V3.1 No alias tubulin alpha-5 0.02 LandPlants
Pp3c4_2000V3.1 No alias tubulin alpha-2 chain 0.02 LandPlants
Smo100162 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 LandPlants
Smo178975 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 LandPlants
Smo405729 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 LandPlants
Solyc02g087880.3.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 LandPlants
Solyc08g006890.3.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 LandPlants
Zm00001e011939_P002 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.04 LandPlants
AMTR_s00033p00112490 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 SeedPlants
GSVIVT01009258001 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 SeedPlants
GSVIVT01011382001 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 SeedPlants
GSVIVT01025462001 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.05 SeedPlants
GSVIVT01037046001 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 SeedPlants
Gb_00907 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.04 SeedPlants
Gb_02715 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 SeedPlants
Gb_07962 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 SeedPlants
LOC_Os03g51600.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.04 SeedPlants
LOC_Os07g38730.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.05 SeedPlants
LOC_Os11g14220.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.04 SeedPlants
MA_184192g0010 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 SeedPlants
MA_273360g0010 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 SeedPlants
Solyc02g087880.3.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.03 SeedPlants
Solyc08g006890.3.1 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 SeedPlants
Zm00001e011939_P002 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.04 SeedPlants
Zm00001e035332_P001 No alias component alpha-Tubulin of alpha-beta-Tubulin heterodimer 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005200 structural constituent of cytoskeleton ISS Interproscan
CC GO:0005618 cell wall IDA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0007017 microtubule-based process TAS Interproscan
BP GO:0009651 response to salt stress IEP Interproscan
CC GO:0016020 membrane IDA Interproscan
CC GO:0045298 tubulin complex ISS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 263 392
IPR003008 Tubulin_FtsZ_GTPase 3 213
No external refs found!