AT1G49940


Description : BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G04770.1); Has 40 Blast hits to 40 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).


Gene families : OG_01_0000793 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000793_tree ,
OG_02_0026819 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_03_0000780 (SeedPlants) Phylogenetic Tree(s): OG_03_0000780_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G49940
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
LOC_Os09g36740.1 No alias meiotic exit regulator (MS5/TDM1) 0.03 Archaeplastida
Mp3g16860.1 No alias meiotic exit regulator (MS5/TDM1) 0.02 Archaeplastida
Zm00001e010252_P001 No alias meiotic exit regulator (MS5/TDM1) 0.03 Archaeplastida
Zm00001e035992_P002 No alias meiotic exit regulator (MS5/TDM1) 0.03 Archaeplastida
LOC_Os09g36740.1 No alias meiotic exit regulator (MS5/TDM1) 0.03 SeedPlants
Zm00001e010252_P001 No alias meiotic exit regulator (MS5/TDM1) 0.02 SeedPlants
Zm00001e035992_P002 No alias meiotic exit regulator (MS5/TDM1) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!