AT1G49870


Description : unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; Has 6518 Blast hits to 5022 proteins in 522 species: Archae - 49; Bacteria - 635; Metazoa - 3264; Fungi - 379; Plants - 242; Viruses - 9; Other Eukaryotes - 1940 (source: NCBI BLink).


Gene families : OG_01_0006329 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006329_tree ,
OG_02_0004982 (LandPlants) Phylogenetic Tree(s): OG_02_0004982_tree ,
OG_03_0005319 (SeedPlants) Phylogenetic Tree(s): OG_03_0005319_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G49870
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00144p00066150 evm_27.TU.AmTr_v1... No description available 0.13 Archaeplastida
GSVIVT01037865001 No alias No description available 0.05 Archaeplastida
Gb_11783 No alias no hits & (original description: none) 0.16 Archaeplastida
Gb_41765 No alias no hits & (original description: none) 0.12 Archaeplastida
LOC_Os03g40780.1 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_99828g0010 No alias no hits & (original description: none) 0.1 Archaeplastida
Pp3c18_18840V3.1 No alias No annotation 0.12 Archaeplastida
Smo420651 No alias No description available 0.1 Archaeplastida
Solyc01g107260.4.1 No alias no hits & (original description: none) 0.12 Archaeplastida
Zm00001e004987_P001 No alias no hits & (original description: none) 0.15 Archaeplastida
AMTR_s00144p00066150 evm_27.TU.AmTr_v1... No description available 0.14 LandPlants
GSVIVT01037865001 No alias No description available 0.05 LandPlants
Gb_11783 No alias no hits & (original description: none) 0.18 LandPlants
Gb_41765 No alias no hits & (original description: none) 0.11 LandPlants
LOC_Os03g40780.1 No alias no hits & (original description: none) 0.07 LandPlants
MA_99828g0010 No alias no hits & (original description: none) 0.08 LandPlants
Pp3c18_18840V3.1 No alias No annotation 0.1 LandPlants
Smo420651 No alias No description available 0.11 LandPlants
Solyc01g107260.4.1 No alias no hits & (original description: none) 0.12 LandPlants
Zm00001e004987_P001 No alias no hits & (original description: none) 0.17 LandPlants
AMTR_s00144p00066150 evm_27.TU.AmTr_v1... No description available 0.13 SeedPlants
GSVIVT01037865001 No alias No description available 0.05 SeedPlants
Gb_11783 No alias no hits & (original description: none) 0.16 SeedPlants
Gb_41765 No alias no hits & (original description: none) 0.11 SeedPlants
LOC_Os03g40780.1 No alias no hits & (original description: none) 0.06 SeedPlants
MA_99828g0010 No alias no hits & (original description: none) 0.08 SeedPlants
Solyc01g107260.4.1 No alias no hits & (original description: none) 0.12 SeedPlants
Zm00001e004987_P001 No alias no hits & (original description: none) 0.17 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0048451 petal formation RCA Interproscan
BP GO:0048453 sepal formation RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!