AT1G49850

Description : RING/U-box superfamily protein

Gene families : OG_01_0010898 (Archaeplastida) Phylogenetic Tree(s): OG_01_0010898_tree ,
OG_02_0010456 (LandPlants) Phylogenetic Tree(s): OG_02_0010456_tree ,
OG_03_0006399 (SeedPlants) Phylogenetic Tree(s): OG_03_0006399_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G49850
Cluster	HCCA: Cluster_103

Target	Alias	Description	ECC score	Gene Family Method
MA_10426524g0010	No alias	Probable E3 ubiquitin-protein ligase RHY1A...	0.02	Archaeplastida
MA_10426524g0010	No alias	Probable E3 ubiquitin-protein ligase RHY1A...	0.02	LandPlants
AMTR_s00001p00272380	evm_27.TU.AmTr_v1...	Protein degradation.peptide tagging.Ubiquitin...	0.01	SeedPlants
MA_10426524g0010	No alias	Probable E3 ubiquitin-protein ligase RHY1A...	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
MF	GO:0008270	zinc ion binding	ISS	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	202	244

External Links

No external refs found!