AT1G49490


Description : Leucine-rich repeat (LRR) family protein


Gene families : OG_01_0000279 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000279_tree ,
OG_02_0000206 (LandPlants) Phylogenetic Tree(s): OG_02_0000206_tree ,
OG_03_0042102 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G49490
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00231840 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 2... 0.03 Archaeplastida
AMTR_s00029p00242570 evm_27.TU.AmTr_v1... Pollen-specific leucine-rich repeat extensin-like... 0.09 Archaeplastida
AMTR_s00029p00242610 evm_27.TU.AmTr_v1... Pollen-specific leucine-rich repeat extensin-like... 0.06 Archaeplastida
AMTR_s00056p00176290 evm_27.TU.AmTr_v1... Leucine-rich repeat extensin-like protein 3... 0.03 Archaeplastida
AT1G12040 LRX1 leucine-rich repeat/extensin 1 0.04 Archaeplastida
AT4G13340 No alias Leucine-rich repeat (LRR) family protein 0.08 Archaeplastida
GSVIVT01031843001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.09 Archaeplastida
Gb_10910 No alias LRR-domain extensin 0.02 Archaeplastida
Gb_26318 No alias LRR-domain extensin 0.05 Archaeplastida
Gb_27021 No alias LRR-domain extensin 0.02 Archaeplastida
LOC_Os01g25460.1 No alias LRR-domain extensin 0.09 Archaeplastida
LOC_Os01g41120.1 No alias LRR-domain extensin 0.04 Archaeplastida
LOC_Os02g04540.1 No alias LRR-domain extensin 0.03 Archaeplastida
LOC_Os04g57430.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os05g09640.1 No alias Leucine-rich repeat extensin-like protein 4... 0.02 Archaeplastida
LOC_Os12g35710.1 No alias LRR-domain extensin 0.06 Archaeplastida
MA_3066179g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp2g25390.1 No alias Leucine-rich repeat extensin-like protein 4... 0.02 Archaeplastida
Mp8g04500.1 No alias Leucine-rich repeat extensin-like protein 1... 0.08 Archaeplastida
Pp3c12_22970V3.1 No alias Leucine-rich repeat (LRR) family protein 0.05 Archaeplastida
Pp3c1_10970V3.1 No alias Leucine-rich repeat (LRR) family protein 0.08 Archaeplastida
Pp3c4_3520V3.1 No alias Leucine-rich repeat (LRR) family protein 0.1 Archaeplastida
Smo412903 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 Archaeplastida
Solyc01g107790.2.1 No alias Uncharacterized protein At4g06744 OS=Arabidopsis... 0.05 Archaeplastida
Solyc01g108900.4.1 No alias LRR-domain extensin 0.06 Archaeplastida
Solyc12g006980.2.1 No alias LRR-domain extensin 0.06 Archaeplastida
Solyc12g088950.3.1 No alias Pollen-specific leucine-rich repeat extensin-like... 0.07 Archaeplastida
Zm00001e017627_P001 No alias Pollen-specific leucine-rich repeat extensin-like... 0.03 Archaeplastida
Zm00001e031241_P001 No alias LRR-domain extensin 0.04 Archaeplastida
Zm00001e041899_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
AMTR_s00029p00242610 evm_27.TU.AmTr_v1... Pollen-specific leucine-rich repeat extensin-like... 0.04 LandPlants
AT1G12040 LRX1 leucine-rich repeat/extensin 1 0.03 LandPlants
AT4G13340 No alias Leucine-rich repeat (LRR) family protein 0.07 LandPlants
GSVIVT01031843001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.08 LandPlants
Gb_26318 No alias LRR-domain extensin 0.04 LandPlants
Gb_27021 No alias LRR-domain extensin 0.02 LandPlants
LOC_Os01g25460.1 No alias LRR-domain extensin 0.08 LandPlants
LOC_Os02g04540.1 No alias LRR-domain extensin 0.02 LandPlants
LOC_Os05g08770.2 No alias LRR-domain extensin 0.02 LandPlants
LOC_Os12g35710.1 No alias LRR-domain extensin 0.06 LandPlants
MA_5516756g0010 No alias LRR-domain extensin 0.02 LandPlants
Mp2g25390.1 No alias Leucine-rich repeat extensin-like protein 4... 0.02 LandPlants
Mp8g04500.1 No alias Leucine-rich repeat extensin-like protein 1... 0.06 LandPlants
Pp3c1_10970V3.1 No alias Leucine-rich repeat (LRR) family protein 0.04 LandPlants
Pp3c4_3520V3.1 No alias Leucine-rich repeat (LRR) family protein 0.05 LandPlants
Pp3c8_3600V3.1 No alias leucine-rich repeat/extensin 1 0.02 LandPlants
Solyc01g108900.4.1 No alias LRR-domain extensin 0.06 LandPlants
Solyc12g006980.2.1 No alias LRR-domain extensin 0.06 LandPlants
Solyc12g088950.3.1 No alias Pollen-specific leucine-rich repeat extensin-like... 0.07 LandPlants

Type GO Term Name Evidence Source
MF GO:0005199 structural constituent of cell wall ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 65 97
No external refs found!