AT1G49210


Description : RING/U-box superfamily protein


Gene families : OG_01_0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000003 (LandPlants) Phylogenetic Tree(s): OG_02_0000003_tree ,
OG_03_0008073 (SeedPlants) Phylogenetic Tree(s): OG_03_0008073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G49210
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00263220 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AMTR_s00004p00172400 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
AMTR_s00021p00161170 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AMTR_s00025p00229930 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT1G63840 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT1G67856 No alias RING/U-box superfamily protein 0.1 Archaeplastida
AT2G17730 NIP2 NEP-interacting protein 2 0.03 Archaeplastida
AT2G42360 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT2G44578 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G20395 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT4G00305 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT4G35480 RHA3B RING-H2 finger A3B 0.06 Archaeplastida
AT4G38140 No alias RING/U-box superfamily protein 0.07 Archaeplastida
AT5G06490 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT5G07040 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G27420 ATL31, CNI1 carbon/nitrogen insensitive 1 0.02 Archaeplastida
AT5G58580 ATL63, TL63 TOXICOS EN LEVADURA 63 0.04 Archaeplastida
AT5G66070 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Cpa|evm.model.tig00020943.22 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Cre01.g009101 No alias No description available 0.03 Archaeplastida
Cre01.g051700 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
GSVIVT01000538001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
GSVIVT01009096001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01009098001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01012015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01012022001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01026978001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Gb_02533 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Gb_04642 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Gb_14775 No alias RING-H2 finger protein ATL78 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Gb_14777 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_15836 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_23066 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_23076 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_28973 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.02 Archaeplastida
Gb_28980 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_35824 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Gb_40644 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g11500.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os01g53500.1 No alias RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os02g35347.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g35365.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g37450.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g45710.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g45780.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g49710.1 No alias IDF1 iron uptake IRT1-ubiquitin ligase 0.03 Archaeplastida
LOC_Os03g44636.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g57410.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os04g16970.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g15170.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os05g39260.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g45060.1 No alias RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os06g08820.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os06g11450.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os07g34180.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g43670.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os09g36500.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g37050.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os10g39770.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os12g02220.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os12g24490.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os12g40460.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_10021g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_10260361g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_10435495g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_10436650g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_111727g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_12363g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_13397g0010 No alias RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_15246g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_159453g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_17390g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_181940g0010 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
MA_214717g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_2159g0010 No alias RING-H2 finger protein ATL78 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_229590g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_308999g0010 No alias RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_308999g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_31736g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_373963g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_5319g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_6931619g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_7553g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_85088g0010 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
MA_895676g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
Pp3c18_5860V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c1_32230V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c20_11600V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c23_10580V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c23_1651V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c26_11650V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Smo101273 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Smo402335 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Smo96681 No alias Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
Solyc01g006910.4.1 No alias RING-H2-class E3 ligase 0.07 Archaeplastida
Solyc01g109200.4.1 No alias RING-H2-class E3 ligase 0.07 Archaeplastida
Solyc02g082420.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc03g114190.1.1 No alias RING-H2 finger protein ATL56 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc03g123680.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc04g081890.1.1 No alias E3 ubiquitin-protein ligase ATL23 OS=Arabidopsis... 0.04 Archaeplastida
Solyc05g010170.2.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc05g010175.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc06g007230.2.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc06g053640.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc06g061250.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc06g063110.3.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Solyc06g150136.1.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Solyc07g053420.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc08g008080.1.1 No alias E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... 0.05 Archaeplastida
Solyc09g075320.1.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Solyc09g089890.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc10g008080.3.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc10g009487.1.1 No alias RING-H2 finger protein ATL20 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc11g005290.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc11g007530.2.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc11g066510.3.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc12g087840.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e007956_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e010787_P001 No alias RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e013809_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e014709_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e014764_P001 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e015470_P001 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Zm00001e015805_P001 No alias NEP1-interacting protein-like 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e015905_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e016474_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e017509_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e017960_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e018028_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e019779_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e021729_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e022742_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e023234_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e023723_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e026193_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e029032_P001 No alias RING-H2-class E3 ligase 0.08 Archaeplastida
Zm00001e032186_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e032838_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e034421_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e037108_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e038229_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e041385_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e041409_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
AMTR_s00021p00161170 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 LandPlants
AMTR_s00059p00176670 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
AMTR_s00102p00069840 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
AT2G42360 No alias RING/U-box superfamily protein 0.03 LandPlants
AT4G35480 RHA3B RING-H2 finger A3B 0.06 LandPlants
AT4G38140 No alias RING/U-box superfamily protein 0.07 LandPlants
GSVIVT01009096001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
GSVIVT01026703001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 LandPlants
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 LandPlants
Gb_02533 No alias RING-H2-class E3 ligase 0.04 LandPlants
Gb_04642 No alias RING-H2-class E3 ligase 0.02 LandPlants
Gb_14775 No alias RING-H2 finger protein ATL78 OS=Arabidopsis thaliana... 0.05 LandPlants
Gb_14777 No alias RING-H2-class E3 ligase 0.03 LandPlants
Gb_14785 No alias RING-H2 finger protein ATL78 OS=Arabidopsis thaliana... 0.02 LandPlants
Gb_14788 No alias RING-H2-class E3 ligase 0.02 LandPlants
Gb_15836 No alias RING-H2-class E3 ligase 0.03 LandPlants
Gb_23066 No alias no hits & (original description: none) 0.03 LandPlants
Gb_23076 No alias RING-H2-class E3 ligase 0.03 LandPlants
LOC_Os01g11500.1 No alias RING-H2-class E3 ligase 0.03 LandPlants
LOC_Os01g60730.2 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.02 LandPlants
LOC_Os01g64620.1 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.03 LandPlants
LOC_Os02g37450.1 No alias no hits & (original description: none) 0.04 LandPlants
LOC_Os02g46100.1 No alias RING-H2-class E3 ligase 0.02 LandPlants
LOC_Os02g57460.1 No alias RING-H2-class E3 ligase 0.03 LandPlants
LOC_Os03g05570.1 No alias RING-H2-class E3 ligase 0.02 LandPlants
LOC_Os04g49550.1 No alias RING-H2-class E3 ligase 0.03 LandPlants
LOC_Os05g39260.1 No alias no hits & (original description: none) 0.03 LandPlants
LOC_Os06g34560.1 No alias no hits & (original description: none) 0.02 LandPlants
LOC_Os06g45580.1 No alias RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.03 LandPlants
LOC_Os07g34180.1 No alias no hits & (original description: none) 0.03 LandPlants
LOC_Os09g36500.1 No alias no hits & (original description: none) 0.03 LandPlants
LOC_Os12g24490.1 No alias RING-H2-class E3 ligase 0.02 LandPlants
LOC_Os12g40460.1 No alias RING-H2-class E3 ligase 0.04 LandPlants
MA_10106144g0010 No alias RING-H2-class E3 ligase 0.02 LandPlants
MA_10260361g0010 No alias RING-H2-class E3 ligase 0.03 LandPlants
MA_10426834g0010 No alias RING-H2-class E3 ligase 0.03 LandPlants
MA_10436650g0010 No alias RING-H2-class E3 ligase 0.02 LandPlants
MA_12363g0010 No alias RING-H2-class E3 ligase 0.03 LandPlants
MA_13397g0010 No alias RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.03 LandPlants
MA_159453g0010 No alias RING-H2-class E3 ligase 0.02 LandPlants
MA_181940g0010 No alias RING-H2-class E3 ligase 0.03 LandPlants
MA_214717g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_25345g0010 No alias RING-H2-class E3 ligase 0.02 LandPlants
MA_26001g0020 No alias RING-H2-class E3 ligase 0.02 LandPlants
MA_308999g0010 No alias RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... 0.03 LandPlants
MA_308999g0020 No alias no hits & (original description: none) 0.04 LandPlants
MA_373963g0010 No alias no hits & (original description: none) 0.05 LandPlants
MA_465316g0010 No alias RING-H2-class E3 ligase 0.02 LandPlants
MA_5319g0010 No alias RING-H2-class E3 ligase 0.04 LandPlants
MA_569551g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_6931619g0010 No alias RING-H2-class E3 ligase 0.04 LandPlants
MA_80729g0030 No alias RING-H2-class E3 ligase 0.02 LandPlants
MA_85088g0010 No alias RING-H2-class E3 ligase 0.05 LandPlants
MA_904294g0010 No alias RING-H2-class E3 ligase 0.02 LandPlants
Pp3c18_5860V3.1 No alias RING/U-box superfamily protein 0.03 LandPlants
Pp3c1_9560V3.1 No alias TOXICOS EN LEVADURA 2 0.02 LandPlants
Pp3c22_15440V3.1 No alias RING/U-box superfamily protein 0.02 LandPlants
Smo402335 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 LandPlants
Smo96681 No alias Protein degradation.peptide tagging.Ubiquitin... 0.06 LandPlants
Solyc01g105620.4.1 No alias no hits & (original description: none) 0.03 LandPlants
Solyc01g109200.4.1 No alias RING-H2-class E3 ligase 0.07 LandPlants
Solyc02g082420.3.1 No alias RING-H2-class E3 ligase 0.03 LandPlants
Solyc03g123680.1.1 No alias RING-H2-class E3 ligase 0.03 LandPlants
Solyc06g007230.2.1 No alias RING-H2-class E3 ligase 0.02 LandPlants
Solyc06g053640.1.1 No alias RING-H2-class E3 ligase 0.03 LandPlants
Solyc06g063110.3.1 No alias RING-H2-class E3 ligase 0.06 LandPlants
Solyc06g150136.1.1 No alias RING-H2-class E3 ligase 0.04 LandPlants
Solyc07g053420.4.1 No alias no hits & (original description: none) 0.02 LandPlants
Solyc09g075320.1.1 No alias RING-H2-class E3 ligase 0.06 LandPlants
Solyc09g089890.1.1 No alias RING-H2-class E3 ligase 0.03 LandPlants
Solyc11g005290.1.1 No alias RING-H2-class E3 ligase 0.03 LandPlants
Solyc11g066510.3.1 No alias RING-H2-class E3 ligase 0.05 LandPlants
Solyc12g087840.1.1 No alias RING-H2-class E3 ligase 0.04 LandPlants
Zm00001e003126_P001 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e007956_P001 No alias RING-H2-class E3 ligase 0.02 LandPlants
Zm00001e010787_P001 No alias RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... 0.03 LandPlants
Zm00001e013412_P001 No alias no hits & (original description: none) 0.03 LandPlants
Zm00001e014764_P001 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.04 LandPlants
Zm00001e015470_P001 No alias RING-H2-class E3 ligase 0.06 LandPlants
Zm00001e016474_P001 No alias RING-H2-class E3 ligase 0.02 LandPlants
Zm00001e017960_P001 No alias no hits & (original description: none) 0.05 LandPlants
Zm00001e018028_P001 No alias RING-H2-class E3 ligase 0.03 LandPlants
Zm00001e031874_P001 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e032186_P001 No alias no hits & (original description: none) 0.06 LandPlants
Zm00001e037108_P001 No alias no hits & (original description: none) 0.03 LandPlants
Zm00001e038107_P001 No alias no hits & (original description: none) 0.03 LandPlants
Zm00001e041385_P001 No alias RING-H2-class E3 ligase 0.03 LandPlants

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IDA Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
BP GO:0016567 protein ubiquitination IDA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 134 177
No external refs found!