Smo422954


Description : Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa subsp. japonica


Gene families : OG_01_0001104 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001104_tree ,
OG_02_0105010 (LandPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo422954
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00268210 evm_27.TU.AmTr_v1... Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00014p00229190 evm_27.TU.AmTr_v1... Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00021p00241290 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.03 Archaeplastida
AMTR_s00033p00133210 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.05 Archaeplastida
AT4G08940 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.05 Archaeplastida
AT5G21970 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.04 Archaeplastida
AT5G62990 emb1692 Ubiquitin carboxyl-terminal hydrolase family protein 0.03 Archaeplastida
Gb_34809 No alias WTF1 plastidial RNA basal splicing factor 0.03 Archaeplastida
LOC_Os05g49610.1 No alias WTF1 plastidial RNA basal splicing factor 0.03 Archaeplastida
LOC_Os09g29760.1 No alias Protein WHATS THIS FACTOR 1 OS=Zea mays... 0.02 Archaeplastida
MA_423098g0010 No alias WTF1 plastidial RNA basal splicing factor 0.03 Archaeplastida
Pp3c26_560V3.1 No alias Ubiquitin carboxyl-terminal hydrolase family protein 0.02 Archaeplastida
Smo409264 No alias Protein WHATS THIS FACTOR 1 OS=Zea mays 0.05 Archaeplastida
Smo98802 No alias Protein WHATS THIS FACTOR 1 homolog OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc04g074280.1.1 No alias Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa... 0.02 Archaeplastida
Zm00001e000591_P002 No alias Protein WHATS THIS FACTOR 1 homolog OS=Oryza sativa... 0.04 Archaeplastida
Zm00001e011811_P001 No alias Protein WHATS THIS FACTOR 1 OS=Zea mays... 0.03 Archaeplastida
Zm00001e026570_P001 No alias WTF1 plastidial RNA basal splicing factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR021099 PORR_domain 17 333
No external refs found!