Smo421405

Description : RNA biosynthesis.transcriptional activation.E2F/DP transcription factor

Gene families : OG_01_0003319 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003319_tree ,
OG_02_0003235 (LandPlants) Phylogenetic Tree(s): OG_02_0003235_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Smo421405
Cluster	HCCA: Cluster_52

Target	Alias	Description	ECC score	Gene Family Method
AT3G01330	E2FF, DEL3, E2L2	DP-E2F-like protein 3	0.03	Archaeplastida
AT3G48160	DEL1, E2FE, E2L3	DP-E2F-like 1	0.04	Archaeplastida
Gb_38482	No alias	DEL cell cycle interphase transcription factor....	0.04	Archaeplastida
LOC_Os02g50630.1	No alias	DEL cell cycle interphase transcription factor....	0.05	Archaeplastida
MA_2814g0010	No alias	DEL cell cycle interphase transcription factor....	0.02	Archaeplastida
Mp3g20990.1	No alias	DEL cell cycle interphase transcription factor....	0.06	Archaeplastida
Pp3c21_13480V3.1	No alias	DP-E2F-like 1	0.04	Archaeplastida
Solyc02g087310.3.1	No alias	DEL cell cycle interphase transcription factor....	0.04	Archaeplastida
Solyc03g113760.3.1	No alias	DEL cell cycle interphase transcription factor....	0.04	Archaeplastida
AT3G01330	E2FF, DEL3, E2L2	DP-E2F-like protein 3	0.03	LandPlants
AT3G48160	DEL1, E2FE, E2L3	DP-E2F-like 1	0.03	LandPlants
Gb_38482	No alias	DEL cell cycle interphase transcription factor....	0.03	LandPlants
LOC_Os02g50630.1	No alias	DEL cell cycle interphase transcription factor....	0.03	LandPlants
LOC_Os06g13670.1	No alias	DEL cell cycle interphase transcription factor....	0.02	LandPlants
MA_2814g0010	No alias	DEL cell cycle interphase transcription factor....	0.02	LandPlants
Mp3g20990.1	No alias	DEL cell cycle interphase transcription factor....	0.05	LandPlants
Pp3c21_13480V3.1	No alias	DP-E2F-like 1	0.04	LandPlants
Solyc02g087310.3.1	No alias	DEL cell cycle interphase transcription factor....	0.04	LandPlants
Solyc03g113760.3.1	No alias	DEL cell cycle interphase transcription factor....	0.04	LandPlants

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003316	E2F_WHTH_DNA-bd_dom	28	93

External Links

No external refs found!

Smo421405

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation