1. Home
  2. Species
  3. Nephrolepis biserrata
  4. Sequence
  5. Nbi_g43954

Nbi_g43954 (ATLUP2, LUP2)


Aliases : ATLUP2, LUP2

Description : squalene-hopene cyclase & original description: none


Gene families : OG0002047 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002047_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g43954

Target Alias Description ECC score Gene Family Method Actions
Ala_g03486 No alias squalene-hopene cyclase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24829 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g12100 ATLUP2, LUP2 squalene-hopene cyclase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16998 ATLUP2, LUP2 squalene-hopene cyclase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g55523 No alias squalene-hopene cyclase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10453.t1 ATLUP2, LUP2,... squalene-hopene cyclase & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene24548.t1 Aspi01Gene24548 squalene-hopene cyclase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene24549.t1 ATLUP2, LUP2,... EC_5.4 intramolecular transferase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene24550.t1 Aspi01Gene24550 squalene-hopene cyclase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24552.t1 Aspi01Gene24552 squalene-hopene cyclase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene36059.t1 ATLUP2, LUP2,... squalene-hopene cyclase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63178.t1 Aspi01Gene63178 EC_5.4 intramolecular transferase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63179.t1 Aspi01Gene63179 EC_5.4 intramolecular transferase & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05266 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z160100.1 ATLUP2, LUP2,... not classified & original description: pacid=50632874... 0.03 OrthoFinder output from all 47 species
Dcu_g19102 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g29334 No alias EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g20110.1 No alias Dammaradiene synthase OS=Dryopteris crassirhizoma... 0.02 OrthoFinder output from all 47 species
Mp8g14000.1 THAS1, THAS Dammaradiene synthase OS=Dryopteris crassirhizoma... 0.02 OrthoFinder output from all 47 species
Mp8g14150.1 LAS1 Dammaradiene synthase OS=Dryopteris crassirhizoma... 0.02 OrthoFinder output from all 47 species
Nbi_g25915 ATLUP2, LUP2 EC_5.4 intramolecular transferase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30647 ATLUP2, LUP2 squalene-hopene cyclase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05657 No alias squalene-hopene cyclase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g34152 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44706 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR032696 SQ_cyclase_C 1 266
No external refs found!