Smo419388


Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG_01_0000092 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000092_tree ,
OG_02_0000040 (LandPlants) Phylogenetic Tree(s): OG_02_0000040_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo419388
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
LOC_Os06g06900.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os06g30090.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Mp1g01110.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Pp3c25_13740V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Solyc01g107140.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc04g077960.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc12g088380.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e016160_P003 No alias transcription factor (bHLH) 0.02 Archaeplastida
AMTR_s00024p00250370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 LandPlants
AT1G27740 RSL4 root hair defective 6-like 4 0.02 LandPlants
LOC_Os11g41640.1 No alias transcription factor (bHLH) 0.02 LandPlants
MA_100071g0010 No alias no hits & (original description: none) 0.02 LandPlants
Mp1g01110.1 No alias transcription factor (bHLH) 0.02 LandPlants
Solyc01g107140.3.1 No alias transcription factor (bHLH) 0.02 LandPlants
Solyc04g077960.1.1 No alias transcription factor (bHLH) 0.02 LandPlants
Solyc12g088380.1.1 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e016160_P003 No alias transcription factor (bHLH) 0.02 LandPlants

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 253 293
No external refs found!