Nbi_g43849


Description : component *(eL27) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001930 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0001930_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g43849
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
Aob_g32262 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Aob_g42395 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Aob_g42644 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Aob_g42646 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Dcu_g31383 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Dcu_g44714 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Ehy_g27724 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.01 OrthoFinder output from all 39 species
Nbi_g43848 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Ppi_g32533 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 39 species
Sam_g12749 No alias component *(eL27) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR001141 Ribosomal_L27e 53 136
No external refs found!