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  5. Nbi_g43632

Nbi_g43632 (ATPDR7, PDR7)


Aliases : ATPDR7, PDR7

Description : subfamily ABCG transporter & original description: none


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g43632
Cluster HCCA: Cluster_317

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene28061.t1 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.01 OrthoFinder output from all 47 species
Mp2g21340.1 ATPDR3, PDR3 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Spa_g19097 ATPDR7, PDR7 not classified & original description: none 1.0 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR043926 ABCG_dom 414 469
IPR013525 ABC_2_trans 535 746
IPR013581 PDR_assoc 751 812
IPR003439 ABC_transporter-like_ATP-bd 912 1064
IPR003439 ABC_transporter-like_ATP-bd 199 381
IPR029481 ABC_trans_N 125 174
No external refs found!