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  5. Nbi_g43568

Nbi_g43568 (ATCCD1, CCD1, NCED1, ATNCED1)


Aliases : ATCCD1, CCD1, NCED1, ATNCED1

Description : not classified & original description: none


Gene families : OG0000239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000239_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g43568

Target Alias Description ECC score Gene Family Method Actions
Aop_g12925 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Aop_g28984 ATNCED9, NCED9 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g36988 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Aspi01Gene29851.t1 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000949.24 ATCCD1, CCD1,... No description available 0.01 OrthoFinder output from all 47 species
Dac_g06005 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
LOC_Os02g47510.1 CCD4, NCED4,... carotenoid cleavage dioxygenase (CCD4) 0.05 OrthoFinder output from all 47 species
Nbi_g12269 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004237 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.05 OrthoFinder output from all 47 species
Sam_g37014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17929 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Tin_g15213 NCED3, SIS7,... EC_1.13 oxidoreductase acTing on single donor with... 0.06 OrthoFinder output from all 47 species
Tin_g30315 ATCCD1, CCD1,... not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 2 94
No external refs found!