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  5. Nbi_g43477

Nbi_g43477 (PNH, AGO10, ZLL)


Aliases : PNH, AGO10, ZLL

Description : not classified & original description: none


Gene families : OG0000157 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g43477

Target Alias Description ECC score Gene Family Method Actions
AT1G69440 AGO7, ZIP Argonaute family protein 0.03 OrthoFinder output from all 47 species
Als_g07869 PNH, AGO10, ZLL not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g17789 AGO1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g58865 AGO1 miRNA recruiting factor (AGO) of RNA-induced silencing... 0.02 OrthoFinder output from all 47 species
Als_g60456 AGO7, ZIP not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0045.g029842 AGO1 not classified & original description: CDS=36-3650 0.03 OrthoFinder output from all 47 species
MA_594g0010 PNH, AGO10, ZLL Protein argonaute PNH1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Ore_g41760 PNH, AGO10, ZLL not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g069270.2.1 AGO2, Solyc02g069270 siRNA-binding factor (AGO2) of non-canonical RdDM pathway 0.03 OrthoFinder output from all 47 species
Solyc09g082830.4.1 PNH, AGO10, ZLL,... RIS-Complex miRNA recruiting factor (AGO1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR014811 ArgoL1 198 245
IPR003165 Piwi 540 872
IPR032473 Argonaute_Mid_dom 450 527
IPR003100 PAZ_dom 278 383
No external refs found!