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  5. Nbi_g43149

Nbi_g43149 (RR14, ARR14)


Aliases : RR14, ARR14

Description : subgroup ARR-B transcription factor & original description: none


Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g43149
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00086p00182350 RR12, ARR12,... RNA biosynthesis.transcriptional activation.ARR-B... 0.03 OrthoFinder output from all 47 species
AMTR_s00176p00045260 ARR1, RR1,... RNA biosynthesis.transcriptional activation.ARR-B... 0.04 OrthoFinder output from all 47 species
Azfi_s0110.g045439 No alias not classified & original description: CDS=1-1449 0.03 OrthoFinder output from all 47 species
Cba_g03227 RR12, ARR12 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.22G035500.1 RR12, ARR12,... subgroup ARR-B transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g03329 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Ppi_g02280 ARR11 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001234 RR12, ARR12 subgroup ARR-B transcription factor & original... 0.03 OrthoFinder output from all 47 species
Smo444702 ARR1, RR1 RNA biosynthesis.transcriptional activation.ARR-B... 0.03 OrthoFinder output from all 47 species
Solyc04g008050.4.1 ARR1, RR1, Solyc04g008050 B-type cytokinin ARR response activator. transcription... 0.04 OrthoFinder output from all 47 species
Zm00001e036325_P002 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR001789 Sig_transdc_resp-reg_receiver 61 149
IPR001005 SANT/Myb 208 258
No external refs found!