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  5. Nbi_g43148

Nbi_g43148


Description : not classified & original description: none


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g43148

Target Alias Description ECC score Gene Family Method Actions
AT3G11000 No alias DCD (Development and Cell Death) domain protein 0.04 OrthoFinder output from all 47 species
Als_g19231 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09280 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene47371.t1 Aspi01Gene47371 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15480 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.1Z051200.1 Ceric.1Z051200 not classified & original description: pacid=50617037... 0.04 OrthoFinder output from all 47 species
Dcu_g13536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os07g35610.1 LOC_Os07g35610 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 94.4) 0.03 OrthoFinder output from all 47 species
Len_g12406 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g33909 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013443 No alias not classified & original description: CDS=271-3063 0.02 OrthoFinder output from all 47 species
Sam_g04265 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g36702 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29448 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011644_P004 Zm00001e011644 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 267.0) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR013989 Dev_and_cell_death_domain 68 190
No external refs found!