Nbi_g43085

Description : component *(uS12) of small ribosomal-subunit (SSU) proteome & original description: none

Gene families : OG0000717 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0000717_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Nbi_g43085
Cluster	HCCA: Cluster_360

Target	Alias	Description	ECC score	Gene Family Method
Adi_g097624	No alias	component *(uS12) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 39 species
Adi_g103991	No alias	component *(uS12) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 39 species
Aob_g13890	No alias	component *(uS12) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 39 species
Aob_g41050	No alias	component *(uS12) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 39 species
Aop_g58090	No alias	component *(uS12) of small ribosomal-subunit (SSU)...	0.05	OrthoFinder output from all 39 species
Dcu_g31924	No alias	component *(uS12) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 39 species
Dde_g36403	No alias	component *(uS12) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 39 species
Dde_g42501	No alias	component *(uS12) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 39 species
Ehy_g13778	No alias	component *(uS12) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 39 species
Nbi_g21468	No alias	component *(uS12) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 39 species
Nbi_g42995	No alias	component *(uS12) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 39 species
Pir_g47318	No alias	component *(uS12) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 39 species
Ppi_g20666	No alias	component *(uS12) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 39 species
Ppi_g23960	No alias	component *(uS12) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 39 species
Ppi_g34564	No alias	component *(uS12) of small ribosomal-subunit (SSU)...	0.02	OrthoFinder output from all 39 species
Sam_g36208	No alias	component *(uS12) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 39 species
Spa_g38481	No alias	component *(uS12) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 39 species
Tin_g34106	No alias	component *(uS12) of small ribosomal-subunit (SSU)...	0.03	OrthoFinder output from all 39 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0004478	methionine adenosyltransferase activity	IEP	HCCA
MF	GO:0004857	enzyme inhibitor activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
BP	GO:0006556	S-adenosylmethionine biosynthetic process	IEP	HCCA
BP	GO:0006790	sulfur compound metabolic process	IEP	HCCA
MF	GO:0008073	ornithine decarboxylase inhibitor activity	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0042979	ornithine decarboxylase regulator activity	IEP	HCCA
BP	GO:0044272	sulfur compound biosynthetic process	IEP	HCCA
BP	GO:0046500	S-adenosylmethionine metabolic process	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0140678	molecular function inhibitor activity	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006032	Ribosomal_S12/S23	17	129

External Links

No external refs found!

Nbi_g43085

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation