Nbi_g43038


Description : not classified & original description: none


Gene families : OG0007513 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007513_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g43038

Target Alias Description ECC score Gene Family Method Actions
AT2G21960 No alias unknown protein; LOCATED IN: chloroplast; EXPRESSED IN:... 0.07 OrthoFinder output from all 47 species
Aev_g25812 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g01575 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00445 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Aspi01Gene56642.t1 Aspi01Gene56642 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g12434 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.08G009100.1 Ceric.08G009100 not classified & original description: pacid=50638619... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000076.165 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g12403 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Dde_g10672 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01022225001 No alias No description available 0.11 OrthoFinder output from all 47 species
Gb_05471 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os04g54640.1 LOC_Os04g54640 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Len_g23494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25435 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
MA_10435134g0010 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
MA_207797g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp4g06870.1 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Msp_g30397 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Pir_g17517 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g43305 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Smo81106 No alias No description available 0.08 OrthoFinder output from all 47 species
Solyc04g011900.4.1 Solyc04g011900 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Spa_g08857 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Tin_g09093 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e006798_P002 Zm00001e006798 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!