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  5. Nbi_g42953

Nbi_g42953


Description : not classified & original description: none


Gene families : OG0001686 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001686_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g42953
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
Adi_g115582 emb1417 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os12g02950.1 LOC_Os12g02950 Pentatricopeptide repeat-containing protein At4g21190... 0.03 OrthoFinder output from all 47 species
Ppi_g61353 emb1417 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g071570.4.1 Solyc02g071570 Pentatricopeptide repeat-containing protein At4g18975,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009092 homoserine metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0019346 transsulfuration IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0050667 homocysteine metabolic process IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!