1. Home
  2. Species
  3. Nephrolepis biserrata
  4. Sequence
  5. Nbi_g42737

Nbi_g42737


Description : not classified & original description: none


Gene families : OG0000118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000118_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g42737
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Aob_g19317 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11082 NFD03, HMGB3, NFD3 DNA bending architectural protein *(HMG-B) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g34037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09268 NFD2, HMG BETA... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18387 NFD2, HMG BETA... DNA bending architectural protein *(HMG-B) & original... 0.03 OrthoFinder output from all 47 species
Pir_g44031 HMGB6 DNA bending architectural protein *(HMG-B) & original... 0.06 OrthoFinder output from all 47 species
Spa_g41182 ATHMG, HMG, SSRP1, NFD not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 38 106
No external refs found!