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  5. Nbi_g42621

Nbi_g42621


Description : CAPE precursor polypeptide & original description: none


Gene families : OG0000174 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000174_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g42621

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene71537.t1 Aspi01Gene71537 CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
MA_53673g0010 No alias Pathogenesis-related protein 1B OS=Nicotiana tabacum... 0.03 OrthoFinder output from all 47 species
Pir_g24600 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g62327 PRB1, ATPRB1 CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19502 No alias CAPE precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g005950.3.1 Solyc09g005950 Pathogenesis-related protein PRMS OS=Zea mays... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR014044 CAP_domain 32 153
No external refs found!