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  4. Sequence
  5. Smo413232

Smo413232


Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG_01_0000092 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000092_tree ,
OG_02_0000040 (LandPlants) Phylogenetic Tree(s): OG_02_0000040_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Smo413232
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AT1G27740 RSL4 root hair defective 6-like 4 0.05 Archaeplastida
AT2G14760 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
AT4G33880 RSL2 ROOT HAIR DEFECTIVE 6-LIKE 2 0.03 Archaeplastida
GSVIVT01018164001 No alias Transcription factor UNE10 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_30839 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os01g02110.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
LOC_Os03g10770.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os07g39940.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os09g28210.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os11g41640.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os12g39850.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
MA_100071g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_29441g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_83500g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
Mp5g09710.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Pp3c16_21590V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.02 Archaeplastida
Pp3c4_24380V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.02 Archaeplastida
Smo404767 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Solyc01g107140.3.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
Solyc02g091440.2.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Solyc03g044460.1.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc04g077960.1.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
Solyc12g088380.1.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
Solyc12g088790.3.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e015610_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e025656_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e035422_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e038765_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
AT1G27740 RSL4 root hair defective 6-like 4 0.02 LandPlants
Gb_09709 No alias transcription factor (bHLH) 0.01 LandPlants
LOC_Os01g02110.1 No alias transcription factor (bHLH) 0.05 LandPlants
LOC_Os01g38610.1 No alias transcription factor (bHLH) 0.02 LandPlants
LOC_Os03g10770.1 No alias transcription factor (bHLH) 0.02 LandPlants
LOC_Os07g39940.1 No alias transcription factor (bHLH) 0.03 LandPlants
LOC_Os11g41640.1 No alias transcription factor (bHLH) 0.03 LandPlants
LOC_Os12g39850.1 No alias transcription factor (bHLH) 0.03 LandPlants
MA_100071g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_306658g0010 No alias transcription factor (bHLH) 0.01 LandPlants
Mp5g09710.1 No alias transcription factor (bHLH) 0.02 LandPlants
Pp3c4_24380V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.02 LandPlants
Solyc01g107140.3.1 No alias transcription factor (bHLH) 0.03 LandPlants
Solyc02g091440.2.1 No alias transcription factor (bHLH) 0.03 LandPlants
Solyc04g077960.1.1 No alias transcription factor (bHLH) 0.02 LandPlants
Solyc12g088380.1.1 No alias transcription factor (bHLH) 0.03 LandPlants
Solyc12g088790.3.1 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e015610_P001 No alias transcription factor (bHLH) 0.03 LandPlants
Zm00001e025656_P001 No alias transcription factor (bHLH) 0.03 LandPlants
Zm00001e035422_P001 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e038765_P001 No alias transcription factor (bHLH) 0.03 LandPlants

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 372 414
No external refs found!