AT1G43560 (Aty2, ty2)

Aliases : Aty2, ty2

Description : thioredoxin Y2

Gene families : OG_01_0000516 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000516_tree ,
OG_02_0007282 (LandPlants) Phylogenetic Tree(s): OG_02_0007282_tree ,
OG_03_0009710 (SeedPlants) Phylogenetic Tree(s): OG_03_0009710_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G43560
Cluster	HCCA: Cluster_55

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00071p00016000	evm_27.TU.AmTr_v1...	Redox homeostasis.chloroplast redox homeostasis.M-type...	0.04	Archaeplastida
Cpa\|evm.model.tig00001477.10	No alias	Redox homeostasis.chloroplast redox homeostasis.X-type...	0.03	Archaeplastida
Cpa\|evm.model.tig00020563.189	No alias	No description available	0.02	Archaeplastida
Cpa\|evm.model.tig00020903.42	No alias	Thioredoxin X, chloroplastic OS=Oryza sativa subsp. japonica	0.01	Archaeplastida
Cre01.g052250	No alias	Redox homeostasis.chloroplast redox homeostasis.X-type...	0.03	Archaeplastida
GSVIVT01010012001	No alias	Redox homeostasis.chloroplast redox homeostasis.M-type...	0.04	Archaeplastida
GSVIVT01014360001	No alias	Redox homeostasis.chloroplast redox homeostasis.M-type...	0.07	Archaeplastida
GSVIVT01026149001	No alias	Redox homeostasis.chloroplast redox homeostasis.X-type...	0.03	Archaeplastida
GSVIVT01034548001	No alias	Redox homeostasis.chloroplast redox homeostasis.Y-type...	0.14	Archaeplastida
Gb_00914	No alias	M-type thioredoxin	0.03	Archaeplastida
Gb_31181	No alias	M-type thioredoxin	0.04	Archaeplastida
Gb_37068	No alias	no hits & (original description: none)	0.04	Archaeplastida
LOC_Os04g57930.1	No alias	X-type thioredoxin	0.06	Archaeplastida
LOC_Os12g08730.1	No alias	M-type thioredoxin	0.08	Archaeplastida
MA_10433314g0010	No alias	X-type thioredoxin	0.04	Archaeplastida
MA_474303g0010	No alias	M-type thioredoxin	0.03	Archaeplastida
Mp3g04790.1	No alias	X-type thioredoxin	0.02	Archaeplastida
Mp4g18950.1	No alias	M-type thioredoxin	0.06	Archaeplastida
Pp3c24_4980V3.1	No alias	thioredoxin X	0.09	Archaeplastida
Pp3c25_2880V3.1	No alias	thioredoxin M-type 1	0.07	Archaeplastida
Pp3c5_23070V3.1	No alias	thioredoxin M-type 1	0.04	Archaeplastida
Pp3c6_10040V3.1	No alias	Thioredoxin superfamily protein	0.09	Archaeplastida
Smo230724	No alias	Redox homeostasis.chloroplast redox homeostasis.M-type...	0.03	Archaeplastida
Smo74205	No alias	Redox homeostasis.chloroplast redox homeostasis.Y-type...	0.02	Archaeplastida
Solyc01g008250.3.1	No alias	X-type thioredoxin	0.09	Archaeplastida
Solyc04g071560.4.1	No alias	Y-type thioredoxin	0.07	Archaeplastida
Solyc12g013810.2.1	No alias	M-type thioredoxin	0.06	Archaeplastida
Zm00001e006545_P001	No alias	no hits & (original description: none)	0.12	Archaeplastida
Zm00001e018385_P001	No alias	M-type thioredoxin	0.04	Archaeplastida
Zm00001e018548_P001	No alias	Y-type thioredoxin	0.03	Archaeplastida
Zm00001e039586_P001	No alias	M-type thioredoxin	0.06	Archaeplastida
GSVIVT01034548001	No alias	Redox homeostasis.chloroplast redox homeostasis.Y-type...	0.13	LandPlants
Smo74205	No alias	Redox homeostasis.chloroplast redox homeostasis.Y-type...	0.02	LandPlants
Solyc04g071560.4.1	No alias	Y-type thioredoxin	0.07	LandPlants
Zm00001e018548_P001	No alias	Y-type thioredoxin	0.03	LandPlants
GSVIVT01034548001	No alias	Redox homeostasis.chloroplast redox homeostasis.Y-type...	0.13	SeedPlants
Solyc04g071560.4.1	No alias	Y-type thioredoxin	0.07	SeedPlants
Zm00001e018548_P001	No alias	Y-type thioredoxin	0.03	SeedPlants

Type	GO Term	Name	Evidence	Source
BP	GO:0000023	maltose metabolic process	RCA	Interproscan
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0005982	starch metabolic process	None	Extended
BP	GO:0005984	disaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
MF	GO:0008047	enzyme activator activity	IDA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009311	oligosaccharide metabolic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	IEP	Interproscan
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009536	plastid	None	Extended
CC	GO:0009570	chloroplast stroma	IDA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009668	plastid membrane organization	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010027	thylakoid membrane organization	RCA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	None	Extended
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IDA	Interproscan
BP	GO:0019252	starch biosynthetic process	RCA	Interproscan
MF	GO:0030234	enzyme regulator activity	None	Extended
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043085	positive regulation of catalytic activity	IDA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044093	positive regulation of molecular function	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0061024	membrane organization	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0098772	molecular function regulator	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013766	Thioredoxin_domain	63	160

External Links

No external refs found!

AT1G43560 (Aty2, ty2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation