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  5. Nbi_g41667

Nbi_g41667


Description : not classified & original description: none


Gene families : OG0007905 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007905_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g41667
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00073300 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
Adi_g046015 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g00497 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g01038 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g28495 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001033.3 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g38996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01015531001 No alias No description available 0.09 OrthoFinder output from all 47 species
Gb_14096 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g33290.1 LOC_Os05g33290 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Lfl_g00193 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10430741g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp6g12170.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g22369 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g06103 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12354 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31346 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g29668 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g00451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e024787_P001 Zm00001e024787 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR021467 DUF3119 74 201
No external refs found!