AT1G42960


Description : FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: in 7 components; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16660.1); Has 120 Blast hits to 120 proteins in 39 species: Archae - 0; Bacteria - 43; Metazoa - 0; Fungi - 0; Plants - 77; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG_01_0004827 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004827_tree ,
OG_02_0004212 (LandPlants) Phylogenetic Tree(s): OG_02_0004212_tree ,
OG_03_0005370 (SeedPlants) Phylogenetic Tree(s): OG_03_0005370_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G42960
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01013404001 No alias No description available 0.12 Archaeplastida
Solyc04g082640.3.1 No alias no hits & (original description: none) 0.14 Archaeplastida
GSVIVT01013404001 No alias No description available 0.12 LandPlants
Solyc04g082640.3.1 No alias no hits & (original description: none) 0.12 LandPlants
GSVIVT01013404001 No alias No description available 0.11 SeedPlants
Solyc04g082640.3.1 No alias no hits & (original description: none) 0.12 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009535 chloroplast thylakoid membrane IDA Interproscan
CC GO:0009536 plastid IDA Interproscan
CC GO:0009706 chloroplast inner membrane IDA Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
CC GO:0016020 membrane IDA Interproscan
BP GO:0019344 cysteine biosynthetic process RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!