Nbi_g41038


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g41038

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00078040 No alias Pentatricopeptide repeat-containing protein At4g35130,... 0.02 OrthoFinder output from all 47 species
AMTR_s00103p00160020 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
AT1G77010 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 OrthoFinder output from all 47 species
AT2G03880 REME1 Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G38010 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g007782 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034914 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036784 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g097754 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g100902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07452 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g23669 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42810 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16739 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g17473 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g22607 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g37258 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06880 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18934 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g31602 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g04742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07904 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g15319 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g22756 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28224 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30099 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04389 LPA66 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09609 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g18085 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28410 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g28679 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33564 MEF19 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g38034 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g70598 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene41775.t1 Aspi01Gene41775 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene58644.t1 Aspi01Gene58644 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene65890.t1 Aspi01Gene65890 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0117.g046569 No alias not classified & original description: CDS=1-2520 0.08 OrthoFinder output from all 47 species
Azfi_s0383.g067429 No alias not classified & original description: CDS=1-1644 0.05 OrthoFinder output from all 47 species
Cba_g05956 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g07268 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g16658 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20040 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20724 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g25304 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g67204 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.12G016200.1 Ceric.12G016200 not classified & original description: pacid=50601153... 0.08 OrthoFinder output from all 47 species
Ceric.12G025700.1 Ceric.12G025700 not classified & original description: pacid=50601618... 0.04 OrthoFinder output from all 47 species
Ceric.13G010800.1 Ceric.13G010800 not classified & original description: pacid=50634967... 0.03 OrthoFinder output from all 47 species
Ceric.15G056400.1 Ceric.15G056400 not classified & original description: pacid=50639467... 0.06 OrthoFinder output from all 47 species
Ceric.17G054900.1 DOT4, Ceric.17G054900 not classified & original description: pacid=50617812... 0.03 OrthoFinder output from all 47 species
Ceric.17G073400.1 OTP86, Ceric.17G073400 not classified & original description: pacid=50617570... 0.07 OrthoFinder output from all 47 species
Ceric.19G000700.1 VAC1, ECB2,... not classified & original description: pacid=50576122... 0.06 OrthoFinder output from all 47 species
Ceric.28G051100.1 Ceric.28G051100 not classified & original description: pacid=50570532... 0.03 OrthoFinder output from all 47 species
Ceric.29G039600.1 Ceric.29G039600 not classified & original description: pacid=50625761... 0.03 OrthoFinder output from all 47 species
Dac_g05578 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g26710 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g27857 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35587 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g38979 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g46025 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05649 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07608 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g08210 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26576 OTP86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g26847 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g36021 EMB2261 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g38688 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g40969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g44609 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45938 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50140 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g05686 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g19431 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18823 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23273 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009574001 OSB1 Cell cycle.organelle machineries.DNA... 0.05 OrthoFinder output from all 47 species
GSVIVT01028747001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Gb_07756 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_21270 OTP84 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
LOC_Os01g60250.1 LOC_Os01g60250 Pentatricopeptide repeat-containing protein At3g14730... 0.04 OrthoFinder output from all 47 species
LOC_Os01g60430.1 LOC_Os01g60430 RNA editing factor (MEF10) 0.05 OrthoFinder output from all 47 species
LOC_Os04g58980.1 LOC_Os04g58980 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
LOC_Os05g45850.1 LOC_Os05g45850 Pentatricopeptide repeat-containing protein At4g33170... 0.02 OrthoFinder output from all 47 species
LOC_Os06g40860.1 LOC_Os06g40860 Pentatricopeptide repeat-containing protein At1g03540... 0.03 OrthoFinder output from all 47 species
LOC_Os07g47370.1 LOC_Os07g47370 Pentatricopeptide repeat-containing protein At4g32430,... 0.05 OrthoFinder output from all 47 species
LOC_Os11g29360.1 OTP82, LOC_Os11g29360 Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
Len_g04350 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g09168 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17788 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18025 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g18591 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g21866 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g30369 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33765 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g47056 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g56238 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g17636 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g33253 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g35187 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g36057 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_116442g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
MA_904305g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Msp_g04421 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g04467 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g15447 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g18240 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g32586 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g32947 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g37617 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g39832 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41392 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Msp_g42980 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g43134 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46064 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g48060 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g04447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08417 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21989 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g27956 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38632 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g38771 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g12341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g22914 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g23126 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14721 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g66077 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g03873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04532 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20500 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30640 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g03998 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06451 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07547 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g07564 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18881 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18927 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31376 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g35865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g39734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g49219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0125.g021664 No alias not classified & original description: CDS=1-1812 0.04 OrthoFinder output from all 47 species
Sam_g36269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40244 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo100216 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Smo34785 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Smo45004 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Smo61782 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.07 OrthoFinder output from all 47 species
Solyc03g114660.1.1 Solyc03g114660 Pentatricopeptide repeat-containing protein At1g18485... 0.06 OrthoFinder output from all 47 species
Spa_g27799 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30407 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g39685 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g40438 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g03655 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g44069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g46233 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011519_P001 Zm00001e011519 Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
Zm00001e013232_P001 Zm00001e013232 Pentatricopeptide repeat-containing protein At2g36730... 0.06 OrthoFinder output from all 47 species
Zm00001e014549_P001 CRR22, Zm00001e014549 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Zm00001e039305_P001 Zm00001e039305 RNA editing factor (MEF13) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 225 272
IPR002885 Pentatricopeptide_repeat 123 170
IPR002885 Pentatricopeptide_repeat 327 375
IPR002885 Pentatricopeptide_repeat 21 69
IPR002885 Pentatricopeptide_repeat 395 426
No external refs found!