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  5. Nbi_g40243

Nbi_g40243 (UXS6)


Aliases : UXS6

Description : EC_4.1 carbon-carbon lyase & original description: none


Gene families : OG0000934 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000934_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g40243

Target Alias Description ECC score Gene Family Method Actions
AT2G28760 UXS6 UDP-XYL synthase 6 0.09 OrthoFinder output from all 47 species
AT2G47650 UXS4 UDP-xylose synthase 4 0.04 OrthoFinder output from all 47 species
AT5G59290 ATUXS3, UXS3 UDP-glucuronic acid decarboxylase 3 0.05 OrthoFinder output from all 47 species
Ala_g18766 UXS5 EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g00514 UXS6 EC_4.1 carbon-carbon lyase & original description: none 0.11 OrthoFinder output from all 47 species
Aop_g00559 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: none 0.07 OrthoFinder output from all 47 species
Ceric.16G012500.1 ATUXS3, UXS3,... EC_4.1 carbon-carbon lyase & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.21G064200.1 AUD1, UXS2,... EC_4.1 carbon-carbon lyase & original description:... 0.06 OrthoFinder output from all 47 species
Dac_g02694 UXS6 EC_4.1 carbon-carbon lyase & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g07260 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03666 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01035142001 AUD1, UXS2, ATUXS2 Carbohydrate metabolism.nucleotide sugar... 0.02 OrthoFinder output from all 47 species
LOC_Os01g62020.1 AUD1, UXS2,... UDP-D-glucuronic acid decarboxylase 0.08 OrthoFinder output from all 47 species
LOC_Os03g16980.1 UXS6, LOC_Os03g16980 UDP-D-glucuronic acid decarboxylase 0.08 OrthoFinder output from all 47 species
Len_g17737 UXS5 EC_4.1 carbon-carbon lyase & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g01266 UXS5 EC_4.1 carbon-carbon lyase & original description: none 0.06 OrthoFinder output from all 47 species
MA_158402g0010 ATUXS3, UXS3 UDP-D-glucuronic acid decarboxylase 0.03 OrthoFinder output from all 47 species
MA_7855g0010 UXS5 UDP-D-glucuronic acid decarboxylase 0.04 OrthoFinder output from all 47 species
Ore_g27692 UXS6 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11590 ATUXS3, UXS3 EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06255 ATUXS3, UXS3 EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009542 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: CDS=1-1377 0.02 OrthoFinder output from all 47 species
Smo438351 UXS5 Carbohydrate metabolism.nucleotide sugar... 0.03 OrthoFinder output from all 47 species
Spa_g10354 UXS6 EC_4.1 carbon-carbon lyase & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g12500 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g18746 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22333 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25943 AUD1, UXS2, ATUXS2 EC_4.1 carbon-carbon lyase & original description: none 0.1 OrthoFinder output from all 47 species
Spa_g49773 UXS6 EC_4.1 carbon-carbon lyase & original description: none 0.13 OrthoFinder output from all 47 species
Zm00001e001241_P001 UXS5, Zm00001e001241 UDP-D-glucuronic acid decarboxylase 0.09 OrthoFinder output from all 47 species
Zm00001e038475_P001 UXS6, Zm00001e038475 UDP-D-glucuronic acid decarboxylase 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 52 346
No external refs found!