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  5. Nbi_g40152

Nbi_g40152


Description : component *(Tic32) of inner envelope TIC translocation system & original description: none


Gene families : OG0000190 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000190_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g40152
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00082650 evm_27.TU.AmTr_v1... Short-chain dehydrogenase TIC 32, chloroplastic... 0.05 OrthoFinder output from all 47 species
AMTR_s00085p00054430 evm_27.TU.AmTr_v1... Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 OrthoFinder output from all 47 species
AT1G64590 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G50130 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g104526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g37903 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g44395 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g01079 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g07973 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25405 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g08891 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g44591 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26691 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16465.t1 Aspi01Gene16465 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene16465.t2 Aspi01Gene16465 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene24658.t1 Aspi01Gene24658 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene56854.t1 Aspi01Gene56854 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57782.t1 Aspi01Gene57782 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63398.t1 Aspi01Gene63398 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0013.g013114 No alias not classified & original description: CDS=139-1332 0.03 OrthoFinder output from all 47 species
Azfi_s0310.g064122 No alias not classified & original description: CDS=91-1152 0.03 OrthoFinder output from all 47 species
Cba_g34508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G038900.1 Ceric.11G038900 not classified & original description: pacid=50595966... 0.03 OrthoFinder output from all 47 species
Ceric.33G014400.1 Ceric.33G014400 not classified & original description: pacid=50607635... 0.04 OrthoFinder output from all 47 species
Dac_g09350 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g23692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06990 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g25457 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g46056 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50051 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g24464 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29744 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g05415 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17639 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01028900001 No alias Protein translocation.chloroplast.inner envelope TIC... 0.03 OrthoFinder output from all 47 species
GSVIVT01028905001 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 0.02 OrthoFinder output from all 47 species
Gb_09534 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Gb_09535 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.06 OrthoFinder output from all 47 species
LOC_Os01g05840.2 LOC_Os01g05840 Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder output from all 47 species
LOC_Os03g02460.1 LOC_Os03g02460 Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 OrthoFinder output from all 47 species
LOC_Os06g03830.1 LOC_Os06g03830 Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder output from all 47 species
LOC_Os10g40020.3 LOC_Os10g40020 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.02 OrthoFinder output from all 47 species
LOC_Os11g07922.1 LOC_Os11g07922 Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 OrthoFinder output from all 47 species
Lfl_g04488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10432182g0010 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.04 OrthoFinder output from all 47 species
MA_125991g0010 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.01 OrthoFinder output from all 47 species
Mp5g09770.1 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder output from all 47 species
Msp_g07055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31463 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g12126 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37040 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59979 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo420551 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 0.02 OrthoFinder output from all 47 species
Smo420931 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 OrthoFinder output from all 47 species
Smo421434 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 OrthoFinder output from all 47 species
Smo439201 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 0.03 OrthoFinder output from all 47 species
Smo85319 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder output from all 47 species
Smo85541 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 OrthoFinder output from all 47 species
Solyc03g025390.3.1 Solyc03g025390 component Tic32 of inner envelope TIC translocation system 0.03 OrthoFinder output from all 47 species
Solyc08g082870.3.1 Solyc08g082870 Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 OrthoFinder output from all 47 species
Solyc09g010510.4.1 Solyc09g010510 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.03 OrthoFinder output from all 47 species
Spa_g46897 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e016903_P001 Zm00001e016903 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 90 236
No external refs found!