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  5. Nbi_g40007

Nbi_g40007 (BAT1)


Aliases : BAT1

Description : gamma-aminobutyric acid transporter *(GABP) & original description: none


Gene families : OG0000428 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000428_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g40007
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Ala_g04214 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Aop_g21345 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.04 OrthoFinder output from all 47 species
Aop_g25166 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.04 OrthoFinder output from all 47 species
Aop_g70760 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.06 OrthoFinder output from all 47 species
Aspi01Gene69357.t1 BAT1, Aspi01Gene69357 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Dac_g28143 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.04 OrthoFinder output from all 47 species
Dde_g19757 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.07 OrthoFinder output from all 47 species
Dde_g23649 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.04 OrthoFinder output from all 47 species
LOC_Os01g42234.1 BAT1, LOC_Os01g42234 gamma-aminobutyric acid transporter (GABP) 0.03 OrthoFinder output from all 47 species
Lfl_g08480 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.05 OrthoFinder output from all 47 species
MA_833954g0010 BAT1 Amino-acid permease BAT1 homolog OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Ppi_g15240 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.04 OrthoFinder output from all 47 species
Smo95941 BAT1 Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Tin_g08154 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e018674_P001 BAT1, Zm00001e018674 gamma-aminobutyric acid transporter (GABP) 0.04 OrthoFinder output from all 47 species
Zm00001e018676_P002 BAT1, Zm00001e018676 gamma-aminobutyric acid transporter (GABP) 0.03 OrthoFinder output from all 47 species
Zm00001e020885_P001 Zm00001e020885 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004109 coproporphyrinogen oxidase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 105 559
No external refs found!