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  5. Nbi_g39867

Nbi_g39867 (UBQ11)


Aliases : UBQ11

Description : UBQ ubiquitin-fold protein & original description: none


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g39867

Target Alias Description ECC score Gene Family Method Actions
AT1G11980 RUB3 ubiquitin-related protein 3 0.02 OrthoFinder output from all 47 species
Als_g08770 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Als_g24990 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26970 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49928 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Als_g63264 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18726 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g32072 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g71259 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g48554 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000144.76 UBQ7, RUB2 Protein degradation.peptide tagging.Related-to-Ubiquitin... 0.02 OrthoFinder output from all 47 species
Dac_g32968 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g43673 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g48344 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g36803 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30758 UBQ12 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_13954g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g08072 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g30561 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31020 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g13717 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g42132 UBQ11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g66317 UBQ11 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55283 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g55284 UBQ4 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005542 UBQ6 not classified & original description: CDS=139-318 0.03 OrthoFinder output from all 47 species
Tin_g22845 UBQ11 UBQ ubiquiTin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 49 120
IPR000626 Ubiquitin-like_dom 1 44
IPR000626 Ubiquitin-like_dom 125 196
No external refs found!