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  5. Nbi_g39486

Nbi_g39486 (STO)


Aliases : STO

Description : BBX class-IV transcription factor & original description: none


Gene families : OG0000403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000403_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Nbi_g39486

Target Alias Description ECC score Gene Family Method Actions
Aev_g49135 No alias BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g11974 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17444 STO BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Mp8g01190.1 STO transcription factor (BBX-DBB) 0.02 OrthoFinder output from all 47 species
Ore_g39232 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g32457 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g062160.3.1 LZF1, STH3,... transcription factor (BBX-DBB) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000315 Znf_B-box 98 140
IPR000315 Znf_B-box 47 90
No external refs found!